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Aliases for RANP6 Gene
Aliases for RANP6 Gene
External Ids for RANP6 Gene
- HGNC: 39861
- NCBI Entrez Gene: 100128266
- Ensembl: ENSG00000213370
Previous GeneCards Identifiers for RANP6 Gene
- GC04M174557
Summaries for RANP6 Gene
GeneCards Summary for RANP6 Gene
RANP6 (RAN Pseudogene 6) is a Pseudogene.
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RANP6 Gene
Genomics for RANP6 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RANP6 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH04J173634 | Promoter | 0.3 | Ensembl | 250.7 | +0.2 | 214 | 0.4 | RANP6 lnc-HAND2-5 MK280453 LINC02269 HAND2 HAND2-AS1 FBXO8 | ||
| GH04J173652 | Enhancer | 0.6 | UCNEbase | 0.4 | -17.7 | -17699 | 0.2 | FEZF1 ZNF843 PRDM6 ZNF18 OSR2 WT1 | RANP6 LINC02269 lnc-HAND2-3 HAND2 HAND2-AS1 FBXO8 | |
| GH04J173642 | Enhancer | 0.3 | Ensembl | 0.4 | -8.5 | -8486 | 1 | ZNF398 | RANP6 LINC02269 lnc-HAND2-3 HAND2 HAND2-AS1 FBXO8 | |
| GH04J173680 | Enhancer | 0.3 | VISTA | 0.3 | -48.1 | -48083 | 4.7 | ATF2 PKNOX1 | LINC02269 lnc-HAND2-3 RANP6 HAND2 FBXO8 | |
| GH04J173643 | Enhancer | 0.2 | Ensembl | 0.4 | -9.5 | -9486 | 0.2 | RANP6 LINC02269 lnc-HAND2-3 HAND2 HAND2-AS1 FBXO8 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RANP6 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RANP6 Gene
Latest Assembly
- chr4:173,633,531-173,634,415
- (GRCh38/hg38)
- Size:
- 885 bases
- Orientation:
- Minus strand
Previous Assembly
- chr4:174,554,682-174,555,566
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 885 bases
- Orientation:
- Minus strand
- chr4:174,554,879-174,555,522
- (GRCh37/hg19 by Ensembl)
- Size:
- 644 bases
- Orientation:
- Minus strand
Genomic View for RANP6 Gene
Genes around RANP6 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 4q34.1 by HGNC
- 4q34.1 by Entrez Gene
- 4q34.1 by Ensembl
RANP6 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RANP6 Gene
Proteins for RANP6 Gene
Post-translational modifications for RANP6 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RANP6
- Origene Custom Protein Services for RANP6
Assay products for research
No data available for DME Specific Peptides for RANP6 Gene
Domains & Families for RANP6 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RANP6 Gene
Function for RANP6 Gene
Phenotypes From GWAS Catalog for RANP6 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RANP6 - Starting at $85 >
- * RANP6 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RANP6
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for RANP6 - Starting at $45 >
- * RANP6 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RANP6 Gene
Localization for RANP6 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RANP6 Gene
Transcripts for RANP6 Gene
mRNA/cDNA for RANP6 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000413691 644 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RANP6 - Starting at $85 >
- * RANP6 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RANP6
miRNA products for research
Inhibitory RNAs for research
Clone products for research
- Applied Biological Materials (abm): Clones for RANP6 - Starting at $45 >
- * RANP6 as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Retro- | Protein Vector - Browse All
- * Viral Packaging Services and High Titer Production Services also available.
Relevant External Links for RANP6 Gene
- GeneLoc Exon Structure for
- RANP6
Expression for RANP6 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RANP6 Gene
Orthologs for RANP6 Gene
No data available for Orthologs for RANP6 Gene
Paralogs for RANP6 Gene
No data available for Paralogs for RANP6 Gene
Variants for RANP6 Gene
Additional Variant Information for RANP6 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RANP6
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RANP6 Gene
Disorders for RANP6 Gene
Additional Disease Information for RANP6
No disorders were found for RANP6 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RANP6 Gene
Publications for RANP6 Gene
- Genome-wide association study of cocaine dependence and related traits: FAM53B identified as a risk gene. (PMID: 23958962) Gelernter J … Farrer L (Molecular psychiatry 2014) 3
ExternalLinks
Products for RANP6 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RANP6
- Origene Custom Protein Services for RANP6
- Browse OriGene Inhibitory RNA Products For RANP6
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RANP6
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RANP6
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RANP6
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RANP6
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RANP6
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RANP6
Sources for RANP6 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB