RANP6 Gene (Pseudogene)

RAN Pseudogene 6

GC04M173633
GIFtS:
8

Aliases for RANP6 Gene

Aliases for RANP6 Gene

  • RAN Pseudogene 6 2 3 5
  • RAN, Member RAS Oncogene Family Pseudogene 6 2 3

External Ids for RANP6 Gene

Previous GeneCards Identifiers for RANP6 Gene

  • GC04M174557

Summaries for RANP6 Gene

GeneCards Summary for RANP6 Gene

RANP6 (RAN Pseudogene 6) is a Pseudogene.

Additional gene information for RANP6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RANP6 Gene

Genomics for RANP6 Gene

GeneHancer (GH) Regulatory Elements for RANP6 Gene

Promoters and enhancers for RANP6 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH04J173634 Promoter 0.3 Ensembl 500.7 +0.2 214 0.4 RANP6 lnc-HAND2-5 MORF4 HAND2-AS1
GH04J173652 Enhancer 0.6 UCNEbase 0.4 -17.7 -17699 0.2 OSR2 WT1 ZNF843 PRDM6 ZNF18 FEZF1 RANP6 LINC02269 HAND2-AS1
GH04J173680 Enhancer 0.5 VISTA Ensembl 0.3 -48.2 -48166 4.8 ATF2 PKNOX1 LINC02269 RANP6
GH04J173642 Enhancer 0.3 Ensembl 0.4 -8.8 -8786 1.6 ZNF398 RANP6 LINC02269 HAND2-AS1
GH04J173655 Enhancer 0.2 VISTA 0.4 -22.4 -22407 2.5 RANP6 LINC02269 HAND2-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RANP6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RANP6 Gene

Genomic Locations for RANP6 Gene
chr4:173,633,531-173,634,415
(GRCh38/hg38)
Size:
885 bases
Orientation:
Minus strand
chr4:174,554,879-174,555,534
(GRCh37/hg19)
Size:
656 bases
Orientation:
Minus strand

Genomic View for RANP6 Gene

Genes around RANP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RANP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RANP6 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RANP6 Gene

Proteins for RANP6 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RANP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RANP6 Gene

Domains & Families for RANP6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RANP6 Gene

Function for RANP6 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RANP6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RANP6 Gene

Localization for RANP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RANP6 Gene

Pathways & Interactions for RANP6 Gene

PathCards logo

SuperPathways for RANP6 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RANP6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RANP6 Gene

Drugs & Compounds for RANP6 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RANP6 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RANP6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RANP6 Gene

No ASD Table

Relevant External Links for RANP6 Gene

GeneLoc Exon Structure for
RANP6

Expression for RANP6 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RANP6 Gene

mRNA expression in normal human tissues for RANP6 Gene
mRNA expression by GTEx for RANP6 Gene
genes like me logo Genes that share expression patterns with RANP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RANP6 Gene

Orthologs for RANP6 Gene

Evolution for RANP6 Gene

ENSEMBL:
Gene Tree for RANP6 (if available)
TreeFam:
Gene Tree for RANP6 (if available)

No data available for Orthologs for RANP6 Gene

Paralogs for RANP6 Gene

No data available for Paralogs for RANP6 Gene

Variants for RANP6 Gene

Additional Variant Information for RANP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RANP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RANP6 Gene

Disorders for RANP6 Gene

Additional Disease Information for RANP6

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for RANP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RANP6 Gene

Publications for RANP6 Gene

  1. Genome-wide association study of cocaine dependence and related traits: FAM53B identified as a risk gene. (PMID: 23958962) Gelernter J … Farrer L (Molecular psychiatry 2014) 3 54

ExternalLinks

View latest publications for RANP6 gene in Mastermind

Products for RANP6 Gene

Sources for RANP6 Gene