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RANP1 Gene(Pseudogene)

RAN, Member RAS Oncogene Family Pseudogene 1

GCID:
GC06P031202
GIFtS:
12
Genes Participants
UDN Logo

Aliases for RANP1 Gene

Aliases for RANP1 Gene

  • RAN, Member RAS Oncogene Family Pseudogene 1 2 3 5
  • Ras-Like 3
  • TC4 3

External Ids for RANP1 Gene

Previous GeneCards Identifiers for RANP1 Gene

  • GC06P030514
  • GC06P030559
  • GC06P030561
  • GC06Pc30590
  • GC06P030453
  • GC06P030253
  • GC06P030486
  • GC06P030629
  • GC06P030651
  • GC06P030758
  • GC06P030895
  • GC06P031054

Summaries for RANP1 Gene

GeneCards Summary for RANP1 Gene

RANP1 (RAN, Member RAS Oncogene Family Pseudogene 1) is a Pseudogene.

Additional gene information for RANP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RANP1 Gene

Genomics for RANP1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RANP1 Gene

Promoters and enhancers for RANP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06I030486 Enhancer 0.3 FANTOM5 550.8 +0.3 326 0.3 GC06P031579 RANP1 ABCF1 TUBB ZNRD1 HLA-E
GH06I030482 Enhancer 0.8 ENCODE 0.8 -3.7 -3656 0.2 RB1 ARID4B SIN3A ZNF2 ZNF48 RAD21 ZNF335 GLIS2 ARID2 ZNF143 RANP1 GC06P031256
GH06I030483 Enhancer 0.6 ENCODE 0.8 -2.0 -2026 0.2 CTCF PKNOX1 ZNF654 NFATC3 REST RAD21 RFX5 MITF ZNF335 ARID2 RANP1 GC06P031256
GH06I030480 Enhancer 0.8 FANTOM5 ENCODE 0.4 -5.2 -5190 0.3 POLR2A FOXK2 IKZF1 PRDM10 EZH2 GC06P031256 RANP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RANP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RANP1 Gene

Genomic Locations for RANP1 Gene
chr6:30,485,885-30,486,976
(GRCh38/hg38)
Size:
1,092 bases
Orientation:
Plus strand
chr6:30,453,662-30,454,724
(GRCh37/hg19)

Genomic View for RANP1 Gene

Genes around RANP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RANP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RANP1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RANP1 Gene

Proteins for RANP1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RANP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RANP1 Gene

Domains & Families for RANP1 Gene

Suggested Antigen Peptide Sequences for RANP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for RANP1 Gene

Function for RANP1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RANP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RANP1 Gene

Localization for RANP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RANP1 Gene

Pathways & Interactions for RANP1 Gene

SuperPathways for RANP1 Gene

PathCards logo More details on SuperPathways for RANP1
No Data Available

Interacting Proteins for RANP1 Gene

Gene Ontology (GO) - Biological Process for RANP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RANP1 Gene

Drugs & Compounds for RANP1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RANP1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RANP1 Gene

(1003) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RANP1 Gene

No ASD Table

Relevant External Links for RANP1 Gene

GeneLoc Exon Structure for
RANP1
ECgene alternative splicing isoforms for
RANP1

Expression for RANP1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RANP1 Gene

mRNA expression in normal human tissues for RANP1 Gene
mRNA expression by GTEx for RANP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RANP1 Gene:

RANP1
genes like me logo Genes that share expression patterns with RANP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RANP1 Gene

Orthologs for RANP1 Gene

Evolution for RANP1 Gene

ENSEMBL:
Gene Tree for RANP1 (if available)
TreeFam:
Gene Tree for RANP1 (if available)

No data available for Orthologs for RANP1 Gene

Paralogs for RANP1 Gene

No data available for Paralogs for RANP1 Gene

Variants for RANP1 Gene

Additional Variant Information for RANP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RANP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RANP1 Gene

Disorders for RANP1 Gene

Additional Disease Information for RANP1

Human Genome Epidemiology Navigator
(HuGE)
ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for RANP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RANP1 Gene

Publications for RANP1 Gene

  1. Quantitative Lys-ϵ-Gly-Gly (diGly) proteomics coupled with inducible RNAi reveals ubiquitin-mediated proteolysis of DNA damage-inducible transcript 4 (DDIT4) by the E3 ligase HUWE1. (PMID: 25147182) Thompson JW … Luchansky SJ (The Journal of biological chemistry 2014) 3 58
  2. New genetic associations detected in a host response study to hepatitis B vaccine. (PMID: 20237496) Davila S … Seielstad M (Genes and immunity 2010) 3 58
  3. Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity. (PMID: 16702430) Shiina T … Bahram S (Genetics 2006) 3 58
  4. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T … Inoko H (Proceedings of the National Academy of Sciences of the United States of America 1999) 3 58

Products for RANP1 Gene

Sources for RANP1 Gene

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