Aliases for RAMACL Gene

Aliases for RAMACL Gene

  • RNA Guanine-7 Methyltransferase Activating Subunit Like (Pseudogene) 2 3 5
  • RNMT Activating MRNA Cap Methyltransferase Subunit Like (Pseudogene) 2 3
  • DJ427A4.2 2 3
  • RNA Guanine-7 Methyltransferase-Activating Subunit-Like (Pseudogene) 13
  • RNMT Activating MRNA Cap Methyltransferase Subunit Pseudogene 1 3
  • Family With Sequence Similarity 103, Member A2 Pseudogene 2
  • Family With Sequence Similarity 103 Member A2, Pseudogene 3
  • Chromosome 6 Open Reading Frame 119 2
  • FAM103A2P 3
  • C6orf119 3
  • RAMMETP1 3
  • RAMMETL 3
  • RAMACL 5

External Ids for RAMACL Gene

Previous HGNC Symbols for RAMACL Gene

  • C6orf119
  • FAM103A2P
  • RAMMETL

Summaries for RAMACL Gene

GeneCards Summary for RAMACL Gene

RAMACL (RNA Guanine-7 Methyltransferase Activating Subunit Like (Pseudogene)) is a Pseudogene. An important paralog of this gene is RAMAC.

Additional gene information for RAMACL Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RAMACL Gene

Genomics for RAMACL Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RAMACL Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J166587 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 -1.1 -1062 3.2 REST FOS ZNF143 RELA PKNOX1 TCF12 IKZF2 YY1 EED SP1 RAMACL SFT2D1 LOC107986671 MPC1 RPS6KA2
GH06J166586 Promoter/Enhancer 1 Ensembl dbSUPER 600.7 +1.0 993 0.4 ZNF143 REST SIX5 HCFC1 MBD2 NFYA TARDBP IRF2 ETS1 CREM RAMACL lnc-MPC1-3 MPC1 RPS6KA2
GH06J166588 Enhancer 0.9 ENCODE dbSUPER 600.7 +0.7 656 0.2 SP1 SIX5 FOS ZNF143 REST YY1 USF2 USF1 ZNF217 HCFC1 RAMACL lnc-MPC1-3 MPC1 RPS6KA2
GH06J166581 Enhancer 1.1 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.0 3954 4.7 ARNT CREB1 BHLHE40 SPI1 KLF17 HIC1 ZNF664 SP7 PKNOX1 RAMACL lnc-MPC1-3 piR-58537-034 MPC1 RPS6KA2
GH06J166624 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -39.3 -39260 4.9 SP1 PRDM10 ZNF692 BACH1 FOXA1 LARP7 ZIC2 PKNOX1 POLR2A PATZ1 RPS6KA2 CEP43 LOC107986671 RAMACL MPC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RAMACL on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RAMACL Gene

Genomic Locations for RAMACL Gene
chr6:166,585,518-166,587,594
(GRCh38/hg38)
Size:
2,077 bases
Orientation:
Minus strand
chr6:166,999,006-167,000,150
(GRCh37/hg19)
Size:
1,145 bases
Orientation:
Minus strand

Genomic View for RAMACL Gene

Genes around RAMACL on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAMACL Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAMACL Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAMACL Gene

Proteins for RAMACL Gene

  • Protein details for RAMACL Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A3B3IU46-A0A3B3IU46_HUMAN
    Recommended name:
    RNA guanine-7 methyltransferase-activating subunit-like (pseudogene)
    Protein Accession:
    A0A3B3IU46

    Protein attributes for RAMACL Gene

    Size:
    118 amino acids
    Molecular mass:
    14367 Da
    Quaternary structure:
    No Data Available

neXtProt entry for RAMACL Gene

Post-translational modifications for RAMACL Gene

No Post-translational modifications

Other Protein References for RAMACL Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for RAMACL Gene

Domains & Families for RAMACL Gene

Protein Domains for RAMACL Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with RAMACL: view

No data available for Gene Families , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RAMACL Gene

Function for RAMACL Gene

Phenotypes From GWAS Catalog for RAMACL Gene

Gene Ontology (GO) - Molecular Function for RAMACL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003723 RNA binding IEA --
genes like me logo Genes that share ontologies with RAMACL: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAMACL Gene

Localization for RAMACL Gene

Gene Ontology (GO) - Cellular Components for RAMACL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005845 mRNA cap binding complex IEA --
genes like me logo Genes that share ontologies with RAMACL: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for RAMACL Gene

Pathways & Interactions for RAMACL Gene

PathCards logo

SuperPathways for RAMACL Gene

No Data Available

Gene Ontology (GO) - Biological Process for RAMACL Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0106005 RNA 5'-cap (guanine-N7)-methylation IEA --
genes like me logo Genes that share ontologies with RAMACL: view

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RAMACL Gene

Drugs & Compounds for RAMACL Gene

No Compound Related Data Available

Transcripts for RAMACL Gene

mRNA/cDNA for RAMACL Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RAMACL Gene

No ASD Table

Relevant External Links for RAMACL Gene

GeneLoc Exon Structure for
RAMACL

Expression for RAMACL Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAMACL Gene

Orthologs for RAMACL Gene

Evolution for RAMACL Gene

ENSEMBL:
Gene Tree for RAMACL (if available)
TreeFam:
Gene Tree for RAMACL (if available)

No data available for Orthologs for RAMACL Gene

Paralogs for RAMACL Gene

Paralogs for RAMACL Gene

genes like me logo Genes that share paralogs with RAMACL: view

Variants for RAMACL Gene

Additional Variant Information for RAMACL Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RAMACL

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RAMACL Gene

Disorders for RAMACL Gene

Additional Disease Information for RAMACL

No disorders were found for RAMACL Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAMACL Gene

Publications for RAMACL Gene

  1. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall AJ … Beck S (Nature 2003) 13

Products for RAMACL Gene

Sources for RAMACL Gene