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Aliases for RAD21-AS1 Gene

Subcategory (RNA class) for RAD21-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for RAD21-AS1 Gene

  • RAD21 Antisense RNA 1 2 3 5
  • RAD21 Antisense RNA 1 (Non-Protein Coding) 2 3
  • Chromosome 8 Open Reading Frame 81 2
  • Non-Protein Coding RNA 255 2
  • NCRNA00255 3
  • C8orf81 3

External Ids for RAD21-AS1 Gene

Previous HGNC Symbols for RAD21-AS1 Gene

  • C8orf81
  • NCRNA00255

Previous GeneCards Identifiers for RAD21-AS1 Gene

  • GC08P117888

Summaries for RAD21-AS1 Gene

GeneCards Summary for RAD21-AS1 Gene

RAD21-AS1 (RAD21 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for RAD21-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAD21-AS1 Gene

Genomics for RAD21-AS1 Gene

GeneHancer (GH) Regulatory Elements for RAD21-AS1 Gene

Promoters and enhancers for RAD21-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I116869 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.7 -1725 5.5 HDGF PKNOX1 ATF1 FOXA2 ARID4B SIN3A FEZF1 DMAP1 BRCA1 YY1 RAD21 RAD21-AS1 MED30 UTP23 MIR3610 GC08P116801
GH08I116900 Enhancer 0.8 ENCODE 11.4 +27.1 27079 1.8 JUN BATF KLF5 IRF4 BRCA1 RELA RFX5 SMC3 RCOR1 ATF7 RAD21 RAD21-AS1 AARD SLC30A8 PIR55072 GC08P116801
GH08I116801 Enhancer 0.6 ENCODE 11.1 -71.8 -71837 1.9 SMARCE1 NEUROD1 CEBPG DPF2 ELF1 FOXA1 ZNF217 CTBP1 JUND ZNF512B GC08P116801 AARD RAD21 RAD21-AS1 UTP23
GH08I116837 Enhancer 0.6 ENCODE 10.5 -36.5 -36537 0.1 LEF1 GATAD2B DPF2 ZBTB7B FOXA1 ZNF217 CTBP1 GATA3 MYNN TARDBP RAD21 RAD21-AS1 GC08P116801 UTP23
GH08I116843 Enhancer 0.4 ENCODE 11.6 -30.2 -30242 0.8 ESRRA POLR2A HLF RAD21 RAD21-AS1 GC08P116801 UTP23
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RAD21-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RAD21-AS1 Gene

Genomic Locations for RAD21-AS1 Gene
chr8:116,874,424-116,876,868
(GRCh38/hg38)
Size:
2,445 bases
Orientation:
Plus strand
chr8:117,886,663-117,889,107
(GRCh37/hg19)

Genomic View for RAD21-AS1 Gene

Genes around RAD21-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAD21-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAD21-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAD21-AS1 Gene

Proteins for RAD21-AS1 Gene

Post-translational modifications for RAD21-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAD21-AS1 Gene

Domains & Families for RAD21-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAD21-AS1 Gene

Function for RAD21-AS1 Gene

Phenotypes From GWAS Catalog for RAD21-AS1 Gene

Phenotypes for RAD21-AS1 Gene

GenomeRNAi human phenotypes for RAD21-AS1:
genes like me logo Genes that share phenotypes with RAD21-AS1: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAD21-AS1 Gene

Localization for RAD21-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RAD21-AS1 Gene

Pathways & Interactions for RAD21-AS1 Gene

SuperPathways for RAD21-AS1 Gene

No Data Available

Interacting Proteins for RAD21-AS1 Gene

Gene Ontology (GO) - Biological Process for RAD21-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RAD21-AS1 Gene

Drugs & Compounds for RAD21-AS1 Gene

No Compound Related Data Available

Transcripts for RAD21-AS1 Gene

mRNA/cDNA for RAD21-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for RAD21-AS1 Gene

RAD21 antisense RNA 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RAD21-AS1 Gene

No ASD Table

Relevant External Links for RAD21-AS1 Gene

GeneLoc Exon Structure for
RAD21-AS1
ECgene alternative splicing isoforms for
RAD21-AS1

Expression for RAD21-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RAD21-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for RAD21-AS1 Gene

This gene is overexpressed in Testis (x9.2).

SOURCE GeneReport for Unigene cluster for RAD21-AS1 Gene:

Hs.706174
genes like me logo Genes that share expression patterns with RAD21-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAD21-AS1 Gene

Orthologs for RAD21-AS1 Gene

Evolution for RAD21-AS1 Gene

ENSEMBL:
Gene Tree for RAD21-AS1 (if available)
TreeFam:
Gene Tree for RAD21-AS1 (if available)

No data available for Orthologs for RAD21-AS1 Gene

Paralogs for RAD21-AS1 Gene

No data available for Paralogs for RAD21-AS1 Gene

Variants for RAD21-AS1 Gene

Sequence variations from dbSNP and Humsavar for RAD21-AS1 Gene

SNP ID Clin Chr 08 pos Variation AA Info Type
rs1001053453 -- 116,874,101(+) C/T upstream_transcript_variant
rs1001084287 -- 116,874,775(+) A/G non_coding_transcript_variant
rs1001481759 -- 116,874,619(+) C/G non_coding_transcript_variant
rs1001546650 -- 116,873,907(+) G/A upstream_transcript_variant
rs1001788776 -- 116,874,790(+) C/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for RAD21-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv831434 CNV gain 17160897
nsv6359 CNV insertion 18451855
nsv1144231 CNV deletion 24896259

Additional Variant Information for RAD21-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RAD21-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for RAD21-AS1 Gene

Disorders for RAD21-AS1 Gene

Additional Disease Information for RAD21-AS1

No disorders were found for RAD21-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAD21-AS1 Gene

Publications for RAD21-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for RAD21-AS1 Gene

Sources for RAD21-AS1 Gene

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