Aliases for RABGAP1L-AS1 Gene

Subcategory (RNA class) for RABGAP1L-AS1 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for RABGAP1L-AS1 Gene

  • RABGAP1L Antisense RNA 1 2 3
  • Novel Transcript 5
  • NONHSAG003525.2 91
  • HSALNG0008577 164
  • Lnc-MRPS14-2 165
  • Z99127.1 5

External Ids for RABGAP1L-AS1 Gene

Summaries for RABGAP1L-AS1 Gene

GeneCards Summary for RABGAP1L-AS1 Gene

RABGAP1L-AS1 (RABGAP1L Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for RABGAP1L-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RABGAP1L-AS1 Gene

Genomics for RABGAP1L-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RABGAP1L-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RABGAP1L-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RABGAP1L-AS1 Gene

Genomic Locations for RABGAP1L-AS1 Gene
chr1:174,934,947-174,954,262
(GRCh38/hg38)
Size:
19,316 bases
Orientation:
Minus strand
chr1:174,904,084-174,923,398
(GRCh37/hg19)
Size:
19,315 bases
Orientation:
Minus strand

Genomic View for RABGAP1L-AS1 Gene

Genes around RABGAP1L-AS1 on UCSC Golden Path with GeneCards custom track
RABGAP1L-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
RABGAP1L-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RABGAP1L-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RABGAP1L-AS1 Gene

Proteins for RABGAP1L-AS1 Gene

Post-translational modifications for RABGAP1L-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RABGAP1L-AS1 Gene

Domains & Families for RABGAP1L-AS1 Gene

Gene Families for RABGAP1L-AS1 Gene

genes like me logo Genes that share domains with RABGAP1L-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RABGAP1L-AS1 Gene

Function for RABGAP1L-AS1 Gene

Phenotypes From GWAS Catalog for RABGAP1L-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RABGAP1L-AS1 Gene

Localization for RABGAP1L-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RABGAP1L-AS1 Gene

Pathways & Interactions for RABGAP1L-AS1 Gene

PathCards logo

SuperPathways for RABGAP1L-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RABGAP1L-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RABGAP1L-AS1 Gene

Drugs & Compounds for RABGAP1L-AS1 Gene

No Compound Related Data Available

Transcripts for RABGAP1L-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for RABGAP1L-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000042A288_9606 lncRNA 670 5

RefSeq: NR_121196,

Ensembl: ENST00000452442 (view in UCSC) ,

LncBook: HSALNT0017838,

LNCipedia: lnc-MRPS14-2:1,

NONCODE: NONHSAT007740.2,

URS0000EF43D1_9606 lncRNA 629 1

Ensembl: ENST00000448686 (view in UCSC) ,

URS0000293CCE_9606 lncRNA 526 2

LNCipedia: lnc-MRPS14-2:2,

NONCODE: NONHSAT007741.2,

URS00009B8C23_9606 lncRNA 971 1

NONCODE: NONHSAT152567.1,

RABGAP1L-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for RABGAP1L-AS1 Gene

2 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for RABGAP1L-AS1 Gene

No ASD Table

Relevant External Links for RABGAP1L-AS1 Gene

GeneLoc Exon Structure for
RABGAP1L-AS1

Expression for RABGAP1L-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RABGAP1L-AS1 Gene

Orthologs for RABGAP1L-AS1 Gene

Evolution for RABGAP1L-AS1 Gene

ENSEMBL:
Gene Tree for RABGAP1L-AS1 (if available)
TreeFam:
Gene Tree for RABGAP1L-AS1 (if available)

No data available for Orthologs for RABGAP1L-AS1 Gene

Paralogs for RABGAP1L-AS1 Gene

No data available for Paralogs for RABGAP1L-AS1 Gene

Variants for RABGAP1L-AS1 Gene

Additional dbSNP identifiers (rs#s) for RABGAP1L-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for RABGAP1L-AS1 Gene

Variant ID Type Subtype PubMed ID
esv1344689 CNV insertion 17803354
nsv512750 CNV insertion 21212237

Additional Variant Information for RABGAP1L-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RABGAP1L-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for RABGAP1L-AS1 Gene

Disorders for RABGAP1L-AS1 Gene

No disorders were found for RABGAP1L-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RABGAP1L-AS1 Gene

Publications for RABGAP1L-AS1 Gene

No publications were found for RABGAP1L-AS1 Gene.

No data available for Mastermind for RABGAP1L-AS1 Gene

Products for RABGAP1L-AS1 Gene

Sources for RABGAP1L-AS1 Gene