Aliases for RAB42P1 Gene

Aliases for RAB42P1 Gene

  • RAB42, Member RAS Oncogene Family, Pseudogene 1 2 3 5
  • RAB42, Member RAS Homolog Family, Pseudogene 2 3
  • RAB42, Member RAS Oncogene Family, Pseudogene 2
  • RAB42, Member RAS Homolog Family 2
  • RAB42P 3
  • RAB42 3

External Ids for RAB42P1 Gene

Previous HGNC Symbols for RAB42P1 Gene

  • RAB42
  • RAB42P

Previous GeneCards Identifiers for RAB42P1 Gene

  • GC14P090359
  • GC14P070532

Summaries for RAB42P1 Gene

GeneCards Summary for RAB42P1 Gene

RAB42P1 (RAB42, Member RAS Oncogene Family, Pseudogene 1) is a Pseudogene.

Additional gene information for RAB42P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RAB42P1 Gene

Genomics for RAB42P1 Gene

GeneHancer (GH) Regulatory Elements for RAB42P1 Gene

Promoters and enhancers for RAB42P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J089894 Enhancer 0.2 Ensembl 500.7 +1.3 1317 0.2 RAB42P1 lnc-FOXN3-7 lnc-FOXN3-8 EFCAB11 ENSG00000259053
GH14J089909 Enhancer 1.5 FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 +20.1 20130 4.6 FOXK2 EP300 ZSCAN5C TCF12 USF1 NCOR1 FOS KDM6A TCF7 FOXA1 NRDE2 RPL21P11 TDP1 EFCAB11 FOXN3 KCNK13 lnc-FOXN3-7 RAB42P1 lnc-FOXN3-8 ENSG00000259053
GH14J089915 Enhancer 0.9 Ensembl ENCODE 0.4 +23.5 23454 0.9 CTCF REST RAD21 TRIM22 SMC3 ZBTB17 JUND ZFHX2 ZNF335 ZNF654 lnc-FOXN3-7 RAB42P1 ENSG00000259053 EFCAB11 lnc-FOXN3-8
GH14J089899 Enhancer 0.6 Ensembl ENCODE 0.4 +9.0 8974 1.7 CTCF RAD21 SMC3 MAFK CEBPB ZNF143 TDP1 RAB42P1 lnc-FOXN3-7 EFCAB11 ENSG00000259053 lnc-FOXN3-8
GH14J089916 Enhancer 0.7 Ensembl ENCODE 0.4 +24.8 24792 1.6 USF1 FOS SALL2 CTCF MAFK BHLHE40 CREB1 USF2 ZSCAN4 TTC7B TDP1 lnc-FOXN3-7 RAB42P1 ENSG00000259053 EFCAB11 lnc-FOXN3-8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RAB42P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RAB42P1 Gene

Genomic Locations for RAB42P1 Gene
chr14:89,891,784-89,892,910
(GRCh38/hg38)
Size:
1,127 bases
Orientation:
Plus strand
chr14:90,358,132-90,359,254
(GRCh37/hg19)
Size:
1,123 bases
Orientation:
Plus strand

Genomic View for RAB42P1 Gene

Genes around RAB42P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAB42P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAB42P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAB42P1 Gene

Proteins for RAB42P1 Gene

Post-translational modifications for RAB42P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAB42P1 Gene

Domains & Families for RAB42P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RAB42P1 Gene

Function for RAB42P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAB42P1 Gene

Localization for RAB42P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RAB42P1 Gene

Pathways & Interactions for RAB42P1 Gene

PathCards logo

SuperPathways for RAB42P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RAB42P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RAB42P1 Gene

Drugs & Compounds for RAB42P1 Gene

No Compound Related Data Available

Transcripts for RAB42P1 Gene

mRNA/cDNA for RAB42P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RAB42P1 Gene

No ASD Table

Relevant External Links for RAB42P1 Gene

GeneLoc Exon Structure for
RAB42P1

Expression for RAB42P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RAB42P1 Gene

genes like me logo Genes that share expression patterns with RAB42P1: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAB42P1 Gene

Orthologs for RAB42P1 Gene

Evolution for RAB42P1 Gene

ENSEMBL:
Gene Tree for RAB42P1 (if available)
TreeFam:
Gene Tree for RAB42P1 (if available)

No data available for Orthologs for RAB42P1 Gene

Paralogs for RAB42P1 Gene

No data available for Paralogs for RAB42P1 Gene

Variants for RAB42P1 Gene

Additional Variant Information for RAB42P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RAB42P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RAB42P1 Gene

Disorders for RAB42P1 Gene

Additional Disease Information for RAB42P1

No disorders were found for RAB42P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAB42P1 Gene

Publications for RAB42P1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 54

Products for RAB42P1 Gene

Sources for RAB42P1 Gene