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Aliases for RAB11AP1 Gene

Subcategory (RNA class) for RAB11AP1 Gene

lncRNA

Aliases for RAB11AP1 Gene

  • RAB11A, Member RAS Oncogene Family Pseudogene 1 2 3 5

External Ids for RAB11AP1 Gene

ORGUL Members for RAB11AP1 Gene

Previous GeneCards Identifiers for RAB11AP1 Gene

  • GC10M095642

Summaries for RAB11AP1 Gene

GeneCards Summary for RAB11AP1 Gene

RAB11AP1 (RAB11A, Member RAS Oncogene Family Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RAB11AP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RAB11AP1 Gene

Genomics for RAB11AP1 Gene

GeneHancer (GH) Regulatory Elements for RAB11AP1 Gene

Promoters and enhancers for RAB11AP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J093880 Enhancer 0.3 Ensembl 600.7 -1.2 -1184 5.2 SCRT2 RAB11AP1 SLC35G1 LGI1
GH10J093870 Enhancer 0.9 Ensembl ENCODE 0.4 +9.5 9481 3.7 BACH1 MAFK NFE2L2 POLR2A HDAC1 ZNF316 CEBPB SOX6 NFE2 EP300 SLC35G1 RAB11AP1 LOC105378437
GH10J093854 Enhancer 0.8 Ensembl ENCODE 0.3 +26.1 26097 3 SP1 PRDM1 SCRT2 JUND SCRT1 YY1 GABPA RCOR1 HNF4A FOS SLC35G1 RAB11AP1 LOC105378437
GH10J093812 Enhancer 0.9 Ensembl ENCODE 0.2 +68.4 68416 2 CTCF MAFK MYC RXRA SMARCA5 MAX USF1 RAD21 SMC3 USF2 LGI1 SLC35G1 LOC105378437 RAB11AP1
GH10J093841 Enhancer 0.5 ENCODE 0.3 +39.9 39918 0.2 SP1 POLR2A ETS1 NANOG POU5F1 SLC35G1 RAB11AP1 LOC105378437
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RAB11AP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RAB11AP1 Gene

Genomic Locations for RAB11AP1 Gene
chr10:93,881,289-93,882,017
(GRCh38/hg38)
Size:
729 bases
Orientation:
Minus strand
chr10:95,641,046-95,641,774
(GRCh37/hg19)
Size:
729 bases
Orientation:
Minus strand

Genomic View for RAB11AP1 Gene

Genes around RAB11AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RAB11AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RAB11AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RAB11AP1 Gene

Proteins for RAB11AP1 Gene

Post-translational modifications for RAB11AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RAB11AP1 Gene

Domains & Families for RAB11AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RAB11AP1 Gene

Function for RAB11AP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RAB11AP1 Gene

Localization for RAB11AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RAB11AP1 Gene

Pathways & Interactions for RAB11AP1 Gene

PathCards logo

SuperPathways for RAB11AP1 Gene

No Data Available

Interacting Proteins for RAB11AP1 Gene

Gene Ontology (GO) - Biological Process for RAB11AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RAB11AP1 Gene

Drugs & Compounds for RAB11AP1 Gene

No Compound Related Data Available

Transcripts for RAB11AP1 Gene

mRNA/cDNA for RAB11AP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RAB11AP1 Gene

No ASD Table

Relevant External Links for RAB11AP1 Gene

GeneLoc Exon Structure for
RAB11AP1
ECgene alternative splicing isoforms for
RAB11AP1

Expression for RAB11AP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RAB11AP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of RAB11AP1 Gene:

RAB11AP1
genes like me logo Genes that share expression patterns with RAB11AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RAB11AP1 Gene

Orthologs for RAB11AP1 Gene

Evolution for RAB11AP1 Gene

ENSEMBL:
Gene Tree for RAB11AP1 (if available)
TreeFam:
Gene Tree for RAB11AP1 (if available)

No data available for Orthologs for RAB11AP1 Gene

Paralogs for RAB11AP1 Gene

No data available for Paralogs for RAB11AP1 Gene

Variants for RAB11AP1 Gene

Additional Variant Information for RAB11AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RAB11AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RAB11AP1 Gene

Disorders for RAB11AP1 Gene

Additional Disease Information for RAB11AP1

No disorders were found for RAB11AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RAB11AP1 Gene

Publications for RAB11AP1 Gene

No publications were found for RAB11AP1 Gene.

No data available for External Links for RAB11AP1 Gene

Products for RAB11AP1 Gene

Sources for RAB11AP1 Gene

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