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Aliases for R3HDM2P1 Gene

Subcategory (RNA class) for R3HDM2P1 Gene

lncRNA

Aliases for R3HDM2P1 Gene

  • R3H Domain Containing 2 Pseudogene 1 2 3 5

External Ids for R3HDM2P1 Gene

ORGUL Members for R3HDM2P1 Gene

Previous GeneCards Identifiers for R3HDM2P1 Gene

  • GC04P134047

Summaries for R3HDM2P1 Gene

GeneCards Summary for R3HDM2P1 Gene

R3HDM2P1 (R3H Domain Containing 2 Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for R3HDM2P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for R3HDM2P1 Gene

Genomics for R3HDM2P1 Gene

GeneHancer (GH) Regulatory Elements for R3HDM2P1 Gene

Promoters and enhancers for R3HDM2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I133148 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 0.3 +24.9 24923 1.9 PKNOX1 ATF1 SIN3A ZNF366 FOS CREM SP3 ELF4 NFYC REST LOC101927359 PCDH10 R3HDM2P1
GH04I133147 Enhancer 0.9 ENCODE dbSUPER 0.3 +23.1 23067 0.4 CTCF MXI1 ZNF654 L3MBTL2 MAFG SIN3A ZNF384 RAD21 ZNF316 POLR2A LOC101927359 R3HDM2P1
GH04I133146 Enhancer 0.8 ENCODE dbSUPER 0.3 +22.7 22677 0.2 CTCF MXI1 ZNF654 TRIM22 MAFG SIN3A ZNF384 RAD21 SMC3 ZNF143 LOC101927359 R3HDM2P1
GH04I133131 Enhancer 0.3 dbSUPER 0.4 +7.8 7753 1.1 WT1 PCDH10 R3HDM2P1 LOC101927359
GH04I133129 Enhancer 0.2 ENCODE 0.4 +6.1 6075 1 LOC101927359 R3HDM2P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around R3HDM2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for R3HDM2P1 Gene

Genomic Locations for R3HDM2P1 Gene
chr4:133,124,104-133,126,063
(GRCh38/hg38)
Size:
1,960 bases
Orientation:
Plus strand
chr4:134,045,259-134,047,218
(GRCh37/hg19)

Genomic View for R3HDM2P1 Gene

Genes around R3HDM2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
R3HDM2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for R3HDM2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for R3HDM2P1 Gene

Proteins for R3HDM2P1 Gene

Post-translational modifications for R3HDM2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for R3HDM2P1 Gene

Domains & Families for R3HDM2P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for R3HDM2P1 Gene

Function for R3HDM2P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for R3HDM2P1 Gene

Localization for R3HDM2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for R3HDM2P1 Gene

Pathways & Interactions for R3HDM2P1 Gene

SuperPathways for R3HDM2P1 Gene

No Data Available

Interacting Proteins for R3HDM2P1 Gene

Gene Ontology (GO) - Biological Process for R3HDM2P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for R3HDM2P1 Gene

Drugs & Compounds for R3HDM2P1 Gene

No Compound Related Data Available

Transcripts for R3HDM2P1 Gene

mRNA/cDNA for R3HDM2P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for R3HDM2P1 Gene

No ASD Table

Relevant External Links for R3HDM2P1 Gene

GeneLoc Exon Structure for
R3HDM2P1
ECgene alternative splicing isoforms for
R3HDM2P1

Expression for R3HDM2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for R3HDM2P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of R3HDM2P1 Gene:

R3HDM2P1
genes like me logo Genes that share expression patterns with R3HDM2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for R3HDM2P1 Gene

Orthologs for R3HDM2P1 Gene

Evolution for R3HDM2P1 Gene

ENSEMBL:
Gene Tree for R3HDM2P1 (if available)
TreeFam:
Gene Tree for R3HDM2P1 (if available)

No data available for Orthologs for R3HDM2P1 Gene

Paralogs for R3HDM2P1 Gene

No data available for Paralogs for R3HDM2P1 Gene

Variants for R3HDM2P1 Gene

Additional Variant Information for R3HDM2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
R3HDM2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for R3HDM2P1 Gene

Disorders for R3HDM2P1 Gene

No disorders were found for R3HDM2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for R3HDM2P1 Gene

Publications for R3HDM2P1 Gene

No publications were found for R3HDM2P1 Gene.

Products for R3HDM2P1 Gene

Sources for R3HDM2P1 Gene

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