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Aliases for PWRN3 Gene

Subcategory (RNA class) for PWRN3 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for PWRN3 Gene

  • Prader-Willi Region Non-Protein Coding RNA 3 2 3 5

External Ids for PWRN3 Gene

Previous GeneCards Identifiers for PWRN3 Gene

  • GC15P024687

Summaries for PWRN3 Gene

GeneCards Summary for PWRN3 Gene

PWRN3 (Prader-Willi Region Non-Protein Coding RNA 3) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for PWRN3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PWRN3 Gene

Genomics for PWRN3 Gene

GeneHancer (GH) Regulatory Elements for PWRN3 Gene

Promoters and enhancers for PWRN3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15I024426 Enhancer 0.2 Ensembl 16.8 -14.0 -14019 0.6 PWRN3 PWRN1 LOC102725165
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PWRN3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PWRN3 Gene

Genomic Locations for PWRN3 Gene
chr15:24,441,127-24,447,967
(GRCh38/hg38)
Size:
6,841 bases
Orientation:
Plus strand
chr15:24,686,274-24,693,114
(GRCh37/hg19)

Genomic View for PWRN3 Gene

Genes around PWRN3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PWRN3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PWRN3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PWRN3 Gene

Proteins for PWRN3 Gene

Post-translational modifications for PWRN3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PWRN3 Gene

Domains & Families for PWRN3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PWRN3 Gene

Function for PWRN3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PWRN3 Gene

Localization for PWRN3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PWRN3 Gene

Pathways & Interactions for PWRN3 Gene

SuperPathways for PWRN3 Gene

No Data Available

Interacting Proteins for PWRN3 Gene

Gene Ontology (GO) - Biological Process for PWRN3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PWRN3 Gene

Drugs & Compounds for PWRN3 Gene

No Compound Related Data Available

Transcripts for PWRN3 Gene

mRNA/cDNA for PWRN3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PWRN3 Gene

No ASD Table

Relevant External Links for PWRN3 Gene

GeneLoc Exon Structure for
PWRN3
ECgene alternative splicing isoforms for
PWRN3

Expression for PWRN3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PWRN3 Gene

mRNA differential expression in normal tissues according to GTEx for PWRN3 Gene

This gene is overexpressed in Testis (x16.6), Thyroid (x5.3), and Ovary (x5.1).

NURSA nuclear receptor signaling pathways regulating expression of PWRN3 Gene:

PWRN3
genes like me logo Genes that share expression patterns with PWRN3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PWRN3 Gene

Orthologs for PWRN3 Gene

Evolution for PWRN3 Gene

ENSEMBL:
Gene Tree for PWRN3 (if available)
TreeFam:
Gene Tree for PWRN3 (if available)

No data available for Orthologs for PWRN3 Gene

Paralogs for PWRN3 Gene

No data available for Paralogs for PWRN3 Gene

Variants for PWRN3 Gene

Sequence variations from dbSNP and Humsavar for PWRN3 Gene

SNP ID Clin Chr 15 pos Variation AA Info Type
rs1001017287 -- 24,446,561(+) A/G intron_variant
rs1001388469 -- 24,448,298(+) C/T downstream_transcript_variant
rs1001448495 -- 24,446,023(+) G/A intron_variant
rs1001567442 -- 24,439,406(+) T/C upstream_transcript_variant
rs1001901101 -- 24,441,155(+) C/T non_coding_transcript_variant

Additional Variant Information for PWRN3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PWRN3

SNP Genotyping and Copy Number Assay Products

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PWRN3 Gene

Disorders for PWRN3 Gene

Additional Disease Information for PWRN3

No disorders were found for PWRN3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PWRN3 Gene

Publications for PWRN3 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58

Products for PWRN3 Gene

Sources for PWRN3 Gene

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