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Aliases for PUDPP2 Gene

Aliases for PUDPP2 Gene

  • Pseudouridine 5'-Phosphatase Pseudogene 2 2
  • Pseudouridine 5-Phosphatase Pseudogene 2 2 3 5
  • Haloacid Dehalogenase-Like Hydrolase Domain Containing 1 Pseudogene 2 2 3
  • Family With Sequence Similarity 16, Member B 2 3
  • HDHD Family Member 1C, Pseudogene 2 3
  • Haloacid Dehalogenase-Like Hydrolase Domain Containing 1A Pseudogene 3
  • HDHD1CP 3
  • HDHD1P2 3
  • FAM16B 3

External Ids for PUDPP2 Gene

Previous HGNC Symbols for PUDPP2 Gene

  • FAM16B
  • HDHD1CP
  • HDHD1P2

Summaries for PUDPP2 Gene

GeneCards Summary for PUDPP2 Gene

PUDPP2 (Pseudouridine 5'-Phosphatase Pseudogene 2) is a Pseudogene.

Additional gene information for PUDPP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PUDPP2 Gene

Genomics for PUDPP2 Gene

GeneHancer (GH) Regulatory Elements for PUDPP2 Gene

Promoters and enhancers for PUDPP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I152070 Enhancer 0.8 ENCODE 11.5 +125.3 125294 0.9 HDAC1 PKNOX1 ATF1 ZNF766 GATA2 ATF7 BCLAF1 CREM NCOA1 ZNF592 S100A11 TCHH ENSG00000226716 PUDPP2 FLG SPTLC1P4 LOC101927949
GH01I152143 Enhancer 0.3 FANTOM5 12.2 +52.9 52892 0.2 CTCF HRNR ENSG00000226716 TCHH PUDPP2 S100A11 TCHHL1 ENSG00000229021 LCE3A RPTN
GH01I152188 Promoter/Enhancer 1.3 Ensembl ENCODE 0.4 +7.6 7586 1.4 PKNOX1 SIN3A BMI1 RAD21 ZNF335 SCRT2 ZNF207 ZNF143 RCOR1 SMARCA5 FLG-AS1 HRNR FLG PIR41917 PUDPP2
GH01I152189 Enhancer 0.8 ENCODE 0.4 +6.5 6469 0.6 MEIS2 CTCF PKNOX1 NFRKB MAX BMI1 RAD21 ZNF335 ZNF664 SCRT2 PIR41917 FLG-AS1 PUDPP2
GH01I152182 Enhancer 0.8 Ensembl ENCODE 0.4 +13.5 13501 1.9 CTCF CEBPB REST COPS2 RAD21 JUND SMC3 FOS THEM5 FLG PIR41917 PUDPP2 FLG-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PUDPP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PUDPP2 Gene

Genomic Locations for PUDPP2 Gene
chr1:152,123,160-152,196,699
(GRCh38/hg38)
Size:
73,540 bases
Orientation:
Minus strand
chr1:152,095,636-152,097,646
(GRCh37/hg19)

Genomic View for PUDPP2 Gene

Genes around PUDPP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PUDPP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PUDPP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PUDPP2 Gene

Proteins for PUDPP2 Gene

Post-translational modifications for PUDPP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PUDPP2 Gene

Domains & Families for PUDPP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PUDPP2 Gene

Function for PUDPP2 Gene

Phenotypes From GWAS Catalog for PUDPP2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PUDPP2 Gene

Localization for PUDPP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PUDPP2 Gene

Pathways & Interactions for PUDPP2 Gene

SuperPathways for PUDPP2 Gene

No Data Available

Interacting Proteins for PUDPP2 Gene

Gene Ontology (GO) - Biological Process for PUDPP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PUDPP2 Gene

Drugs & Compounds for PUDPP2 Gene

No Compound Related Data Available

Transcripts for PUDPP2 Gene

mRNA/cDNA for PUDPP2 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PUDPP2 Gene

No ASD Table

Relevant External Links for PUDPP2 Gene

GeneLoc Exon Structure for
PUDPP2
ECgene alternative splicing isoforms for
PUDPP2

Expression for PUDPP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of PUDPP2 Gene:

PUDPP2
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PUDPP2 Gene

Orthologs for PUDPP2 Gene

Evolution for PUDPP2 Gene

ENSEMBL:
Gene Tree for PUDPP2 (if available)
TreeFam:
Gene Tree for PUDPP2 (if available)

No data available for Orthologs for PUDPP2 Gene

Paralogs for PUDPP2 Gene

No data available for Paralogs for PUDPP2 Gene

Variants for PUDPP2 Gene

Additional Variant Information for PUDPP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PUDPP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PUDPP2 Gene

Disorders for PUDPP2 Gene

No disorders were found for PUDPP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PUDPP2 Gene

Publications for PUDPP2 Gene

  1. Isolation of a new gene from the distal short arm of the human X chromosome that escapes X-inactivation. (PMID: 1284467) Yen PH … Shapiro L (Human molecular genetics 1992) 2 3 58

Products for PUDPP2 Gene

Sources for PUDPP2 Gene

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