PTP4A1P5 Gene (Pseudogene)

PTP4A1 Pseudogene 5

GC0XM027447
GIFtS:
5
See more...

Aliases for PTP4A1P5 Gene

Aliases for PTP4A1P5 Gene

  • PTP4A1 Pseudogene 5 2 3 5
  • Protein Tyrosine Phosphatase Type IVA, Member 1 Pseudogene 5 2 3
  • PTP4A1P5 5

External Ids for PTP4A1P5 Gene

Summaries for PTP4A1P5 Gene

GeneCards Summary for PTP4A1P5 Gene

PTP4A1P5 (PTP4A1 Pseudogene 5) is a Pseudogene.

Additional gene information for PTP4A1P5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PTP4A1P5 Gene

Genomics for PTP4A1P5 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for PTP4A1P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH0XJ027438 Enhancer 0.6 Ensembl 0.4 -11.2 -11170 2 GATAD2A ZNF7 CEBPA SOX13 NFIL3 HLF FOXA3 CEBPG CEBPB ZNF644 PTP4A1P5 lnc-PPP4R3C-7 piR-45471-637 PPP4R3C
GH0XJ027444 Enhancer 0.3 ENCODE 0.4 -16.6 -16568 0.2 RBFOX2 NFIA piR-45471-637 PPP4R3C PTP4A1P5 lnc-PPP4R3C-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PTP4A1P5 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PTP4A1P5 Gene

Genomic Locations for PTP4A1P5 Gene
chrX:27,427,721-27,428,231
(GRCh38/hg38)
Size:
511 bases
Orientation:
Minus strand
chrX:27,445,838-27,446,348
(GRCh37/hg19)
Size:
511 bases
Orientation:
Minus strand

Genomic View for PTP4A1P5 Gene

Genes around PTP4A1P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PTP4A1P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PTP4A1P5 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for PTP4A1P5 Gene

Proteins for PTP4A1P5 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for PTP4A1P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PTP4A1P5 Gene

Domains & Families for PTP4A1P5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PTP4A1P5 Gene

Function for PTP4A1P5 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PTP4A1P5 Gene

Localization for PTP4A1P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PTP4A1P5 Gene

Pathways & Interactions for PTP4A1P5 Gene

PathCards logo

SuperPathways for PTP4A1P5 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PTP4A1P5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PTP4A1P5 Gene

Drugs & Compounds for PTP4A1P5 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for PTP4A1P5 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for PTP4A1P5 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PTP4A1P5 Gene

No ASD Table

Relevant External Links for PTP4A1P5 Gene

GeneLoc Exon Structure for
PTP4A1P5

Expression for PTP4A1P5 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PTP4A1P5 Gene

mRNA expression in normal human tissues for PTP4A1P5 Gene
mRNA expression by GTEx for PTP4A1P5 Gene
genes like me logo Genes that share expression patterns with PTP4A1P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PTP4A1P5 Gene

Orthologs for PTP4A1P5 Gene

Evolution for PTP4A1P5 Gene

ENSEMBL:
Gene Tree for PTP4A1P5 (if available)
TreeFam:
Gene Tree for PTP4A1P5 (if available)

No data available for Orthologs for PTP4A1P5 Gene

Paralogs for PTP4A1P5 Gene

No data available for Paralogs for PTP4A1P5 Gene

Variants for PTP4A1P5 Gene

Additional Variant Information for PTP4A1P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PTP4A1P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PTP4A1P5 Gene

Disorders for PTP4A1P5 Gene

No disorders were found for PTP4A1P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PTP4A1P5 Gene

Publications for PTP4A1P5 Gene

No publications were found for PTP4A1P5 Gene.

No data available for Mastermind for PTP4A1P5 Gene

Products for PTP4A1P5 Gene

Sources for PTP4A1P5 Gene