Aliases for PTMAP6 Gene

Aliases for PTMAP6 Gene

  • Prothymosin Alpha Pseudogene 6 2 3 5
  • DJ539E24.2 2 3
  • Prothymosin, Alpha Pseudogene 6 2
  • PTMAP6 5

External Ids for PTMAP6 Gene

Previous GeneCards Identifiers for PTMAP6 Gene

  • GC20U990216
  • GC20M055914
  • GC20M055961
  • GC20M054709
  • GC20M055276
  • GC20M052059

Summaries for PTMAP6 Gene

GeneCards Summary for PTMAP6 Gene

PTMAP6 (Prothymosin Alpha Pseudogene 6) is a Pseudogene.

Additional gene information for PTMAP6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PTMAP6 Gene

Genomics for PTMAP6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PTMAP6 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PTMAP6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PTMAP6 Gene

Genomic Locations for PTMAP6 Gene
chr20:56,700,837-56,701,514
(GRCh38/hg38)
Size:
678 bases
Orientation:
Minus strand
chr20:55,275,893-55,276,570
(GRCh37/hg19)
Size:
678 bases
Orientation:
Minus strand

Genomic View for PTMAP6 Gene

Genes around PTMAP6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PTMAP6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PTMAP6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PTMAP6 Gene

Proteins for PTMAP6 Gene

Post-translational modifications for PTMAP6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PTMAP6 Gene

Domains & Families for PTMAP6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PTMAP6 Gene

Function for PTMAP6 Gene

Phenotypes From GWAS Catalog for PTMAP6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PTMAP6 Gene

Localization for PTMAP6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PTMAP6 Gene

Pathways & Interactions for PTMAP6 Gene

PathCards logo

SuperPathways for PTMAP6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PTMAP6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PTMAP6 Gene

Drugs & Compounds for PTMAP6 Gene

No Compound Related Data Available

Transcripts for PTMAP6 Gene

mRNA/cDNA for PTMAP6 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PTMAP6 Gene

No ASD Table

Relevant External Links for PTMAP6 Gene

GeneLoc Exon Structure for
PTMAP6

Expression for PTMAP6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PTMAP6 Gene

genes like me logo Genes that share expression patterns with PTMAP6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PTMAP6 Gene

Orthologs for PTMAP6 Gene

Evolution for PTMAP6 Gene

ENSEMBL:
Gene Tree for PTMAP6 (if available)
TreeFam:
Gene Tree for PTMAP6 (if available)

No data available for Orthologs for PTMAP6 Gene

Paralogs for PTMAP6 Gene

No data available for Paralogs for PTMAP6 Gene

Variants for PTMAP6 Gene

Additional Variant Information for PTMAP6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PTMAP6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PTMAP6 Gene

Disorders for PTMAP6 Gene

Additional Disease Information for PTMAP6

Genetic Association Database
(GAD)

No disorders were found for PTMAP6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PTMAP6 Gene

Publications for PTMAP6 Gene

  1. Identification of nine novel loci associated with white blood cell subtypes in a Japanese population. (PMID: 21738478) Okada Y … Kamatani N (PLoS genetics 2011) 41
  2. A genomewide association study of citalopram response in major depressive disorder. (PMID: 19846067) Garriock HA … Hamilton SP (Biological psychiatry 2010) 41

Products for PTMAP6 Gene

Sources for PTMAP6 Gene