Aliases for PTMAP4 Gene

Aliases for PTMAP4 Gene

  • Prothymosin Alpha Pseudogene 4 2 3 5
  • Prothymosin, Alpha Pseudogene 4 (Gene Sequence 112) 2 3
  • Prothymosin, Alpha Pseudogene 4 2
  • Prothymosin Alpha 3
  • PTMA 3

External Ids for PTMAP4 Gene

Previous GeneCards Identifiers for PTMAP4 Gene

  • GC00U990292
  • GC12U900044
  • GC12M009293
  • GC12M009283
  • GC12M009391

Summaries for PTMAP4 Gene

GeneCards Summary for PTMAP4 Gene

PTMAP4 (Prothymosin Alpha Pseudogene 4) is a Pseudogene.

Additional gene information for PTMAP4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PTMAP4 Gene

Genomics for PTMAP4 Gene

GeneHancer (GH) Regulatory Elements for PTMAP4 Gene

Promoters and enhancers for PTMAP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J009240 Promoter/Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 750.6 0.0 -4 1.4 YY1 RAD21 ZNF513 ENSG00000256427 MIR1244-3 LINC00987 PTMAP4 lnc-PZP-5 A2MP1 DDX12P PZP LINC02367 ENSG00000111788
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PTMAP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PTMAP4 Gene

Genomic Locations for PTMAP4 Gene
chr12:9,239,326-9,240,496
(GRCh38/hg38)
Size:
1,171 bases
Orientation:
Minus strand
chr12:9,391,909-9,393,092
(GRCh37/hg19)
Size:
1,184 bases
Orientation:
Minus strand

Genomic View for PTMAP4 Gene

Genes around PTMAP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PTMAP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PTMAP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PTMAP4 Gene

Proteins for PTMAP4 Gene

Post-translational modifications for PTMAP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PTMAP4 Gene

Domains & Families for PTMAP4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PTMAP4 Gene

Function for PTMAP4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PTMAP4 Gene

Localization for PTMAP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PTMAP4 Gene

Pathways & Interactions for PTMAP4 Gene

PathCards logo

SuperPathways for PTMAP4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PTMAP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PTMAP4 Gene

Drugs & Compounds for PTMAP4 Gene

No Compound Related Data Available

Transcripts for PTMAP4 Gene

mRNA/cDNA for PTMAP4 Gene

(3) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PTMAP4 Gene

No ASD Table

Relevant External Links for PTMAP4 Gene

GeneLoc Exon Structure for
PTMAP4
ECgene alternative splicing isoforms for
PTMAP4

Expression for PTMAP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PTMAP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of PTMAP4 Gene:

PTMAP4
genes like me logo Genes that share expression patterns with PTMAP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PTMAP4 Gene

Orthologs for PTMAP4 Gene

Evolution for PTMAP4 Gene

ENSEMBL:
Gene Tree for PTMAP4 (if available)
TreeFam:
Gene Tree for PTMAP4 (if available)

No data available for Orthologs for PTMAP4 Gene

Paralogs for PTMAP4 Gene

No data available for Paralogs for PTMAP4 Gene

Variants for PTMAP4 Gene

Additional Variant Information for PTMAP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PTMAP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PTMAP4 Gene

Disorders for PTMAP4 Gene

Additional Disease Information for PTMAP4

Genetic Association Database
(GAD)

No disorders were found for PTMAP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PTMAP4 Gene

Publications for PTMAP4 Gene

  1. The human prothymosin alpha gene family contains several processed pseudogenes lacking deleterious lesions. (PMID: 1612591) Manrow RE … Berger SL (Genomics 1992) 2 3 56
  2. Genome-wide association with diabetes-related traits in the Framingham Heart Study. (PMID: 17903298) Meigs JB … Dupuis J (BMC medical genetics 2007) 43 56
  3. [New intronless members of human prothymosin alpha genes]. (PMID: 8592501) Rubtsov IuP … Vartapetian AB (Molekuliarnaia biologiia 1995) 3 56
  4. Isolation and partial sequencing of the human prothymosin alpha gene family. Evidence against export of the gene products. (PMID: 2708378) Eschenfeldt WH … Berger SL (The Journal of biological chemistry 1989) 3 56

Products for PTMAP4 Gene

Sources for PTMAP4 Gene