Aliases for PTMAP11 Gene

Aliases for PTMAP11 Gene

  • Prothymosin Alpha Pseudogene 11 2 3 5
  • PTMAP11 5

External Ids for PTMAP11 Gene

Summaries for PTMAP11 Gene

GeneCards Summary for PTMAP11 Gene

PTMAP11 (Prothymosin Alpha Pseudogene 11) is a Pseudogene.

Additional gene information for PTMAP11 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PTMAP11 Gene

Genomics for PTMAP11 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PTMAP11 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PTMAP11 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PTMAP11 Gene

Latest Assembly
chr9:96,909,075-96,910,455
(GRCh38/hg38)
Size:
1,381 bases
Orientation:
Plus strand

Previous Assembly
chr9:99,671,357-99,672,737
(GRCh37/hg19 by Entrez Gene)
Size:
1,381 bases
Orientation:
Plus strand

chr9:99,672,358-99,672,687
(GRCh37/hg19 by Ensembl)
Size:
330 bases
Orientation:
Plus strand

Genomic View for PTMAP11 Gene

Genes around PTMAP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PTMAP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PTMAP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PTMAP11 Gene

Proteins for PTMAP11 Gene

Post-translational modifications for PTMAP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PTMAP11 Gene

Domains & Families for PTMAP11 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PTMAP11 Gene

Function for PTMAP11 Gene

Phenotypes for PTMAP11 Gene

genes like me logo Genes that share phenotypes with PTMAP11: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PTMAP11 Gene

Localization for PTMAP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PTMAP11 Gene

Pathways & Interactions for PTMAP11 Gene

PathCards logo

SuperPathways for PTMAP11 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PTMAP11 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PTMAP11 Gene

Drugs & Compounds for PTMAP11 Gene

No Compound Related Data Available

Transcripts for PTMAP11 Gene

mRNA/cDNA for PTMAP11 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PTMAP11 Gene

No ASD Table

Relevant External Links for PTMAP11 Gene

GeneLoc Exon Structure for
PTMAP11

Expression for PTMAP11 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PTMAP11

SOURCE GeneReport for Unigene cluster for PTMAP11 Gene:

Hs.653264
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PTMAP11 Gene

Orthologs for PTMAP11 Gene

Evolution for PTMAP11 Gene

ENSEMBL:
Gene Tree for PTMAP11 (if available)
TreeFam:
Gene Tree for PTMAP11 (if available)
Alliance of Genome Resources:
Additional Orthologs for PTMAP11

No data available for Orthologs for PTMAP11 Gene

Paralogs for PTMAP11 Gene

No data available for Paralogs for PTMAP11 Gene

Variants for PTMAP11 Gene

Structural Variations from Database of Genomic Variants (DGV) for PTMAP11 Gene

Variant ID Type Subtype PubMed ID
dgv2169e212 CNV loss 25503493
esv2738813 CNV deletion 23290073
nsv1132741 CNV duplication 24896259
nsv1147999 OTHER inversion 26484159
nsv1161888 CNV deletion 26073780
nsv442560 CNV loss 18776908
nsv520001 CNV loss 19592680
nsv831660 CNV gain 17160897
nsv831661 CNV loss 17160897
nsv972430 CNV duplication 23825009
nsv982326 CNV duplication 23825009

Additional Variant Information for PTMAP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PTMAP11
Leiden Open Variation Database (LOVD)
PTMAP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance and Variation tolerance for PTMAP11 Gene

Disorders for PTMAP11 Gene

No disorders were found for PTMAP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PTMAP11 Gene

Publications for PTMAP11 Gene

No publications were found for PTMAP11 Gene.

No data available for Mastermind for PTMAP11 Gene

Products for PTMAP11 Gene

Sources for PTMAP11 Gene