PTGES3P1 Gene (Pseudogene)

Prostaglandin E Synthase 3 Pseudogene 1

GC01M089103
GIFtS:
9
See more...

Aliases for PTGES3P1 Gene

Aliases for PTGES3P1 Gene

  • Prostaglandin E Synthase 3 Pseudogene 1 2 3 5
  • Prostaglandin E Synthase 3 (Cytosolic) Pseudogene 1 2 3
  • HCG2028557 3
  • PTGES3P1 5
  • PTGES3P 3

External Ids for PTGES3P1 Gene

Previous GeneCards Identifiers for PTGES3P1 Gene

  • GC01M089572
  • GC01M089573

Summaries for PTGES3P1 Gene

GeneCards Summary for PTGES3P1 Gene

PTGES3P1 (Prostaglandin E Synthase 3 Pseudogene 1) is a Pseudogene.

Additional gene information for PTGES3P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PTGES3P1 Gene

Genomics for PTGES3P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for PTGES3P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J089103 Enhancer 0.6 dbSUPER 256.1 -1.9 -1898 7.6 ZNF316 NFE2 JUND NRF1 MAFG ZNF143 ATF4 CREM EP300 BACH1 PTGES3P1 GBP7 GBP3 GBP6 ENSG00000237568 GBP5 lnc-GBP2-1 LOC112268267 GBP1 GBP2
GH01J088990 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 4.8 +112.4 112397 4 TBP SP1 MNT IKZF1 SMAD5 MBD2 ZNF217 POLR2A BHLHE40 ZEB1 KYAT3 HSALNG0005043 RBMXL1 GBP3 PKN2 ELOCP19 GTF2B GBP5 GBP6 ENSG00000235308
GH01J089123 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5.1 -21.6 -21631 7.2 CEBPA IRF2 CEBPB ARNT TRIM22 SAP130 EP300 TAL1 RXRA PRDM1 GBP2 LOC105378842 piR-31470-024 GBP1 GBP7 GBP5 GBP4 GBP3 ENSG00000237568 GTF2B
GH01J089063 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE CraniofacialAtlas 4.4 +40.3 40299 3.3 CEBPB FOXA2 RXRA PRDM1 ZBTB33 TBP JUND BMI1 RAD21 REST GBP1 GBP3 GBP5 GBP7 PTGES3P1 lnc-GBP3-2 NONHSAG002014.2-001 LOC105378841 ENSG00000286802
GH01J089001 Enhancer 0.6 FANTOM5 Ensembl 4.4 +102.5 102528 2.4 SMARCA4 RNF2 lnc-PKN2-5 GBP3 GBP7 GBP5 PTGES3P1 LRRC8B GTF2B GBP2 KYAT3 HSALNG0005043
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PTGES3P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PTGES3P1 Gene

Latest Assembly
chr1:89,103,119-89,104,954
(GRCh38/hg38)
Size:
1,836 bases
Orientation:
Minus strand

Previous Assembly
chr1:89,568,802-89,570,637
(GRCh37/hg19 by Entrez Gene)
Size:
1,836 bases
Orientation:
Minus strand

chr1:89,569,968-89,570,450
(GRCh37/hg19 by Ensembl)
Size:
483 bases
Orientation:
Minus strand

Genomic View for PTGES3P1 Gene

Genes around PTGES3P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PTGES3P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PTGES3P1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for PTGES3P1 Gene

Proteins for PTGES3P1 Gene

Products:

  1. Antibodies for research
  2. Protein products for research
  3. Assay products for research

Post-translational modifications for PTGES3P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PTGES3P1 Gene

Domains & Families for PTGES3P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PTGES3P1 Gene

Function for PTGES3P1 Gene

Products:

  1. Animal Models for research
  2. CRISPR products for research
  3. miRNA products for research
  4. Inhibitory RNAs for research
  5. Clone products for research
  6. Cell Lines for research

Phenotypes From GWAS Catalog for PTGES3P1 Gene

Phenotypes for PTGES3P1 Gene

GenomeRNAi human phenotypes for PTGES3P1:
genes like me logo Genes that share phenotypes with PTGES3P1: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PTGES3P1 Gene

Localization for PTGES3P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PTGES3P1 Gene

Pathways & Interactions for PTGES3P1 Gene

PathCards logo

SuperPathways for PTGES3P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PTGES3P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PTGES3P1 Gene

Drugs & Compounds for PTGES3P1 Gene

Products:

  1. Drug products for research
No Compound Related Data Available

Transcripts for PTGES3P1 Gene

Products:

  1. CRISPR products for research
  2. miRNA products for research
  3. Inhibitory RNAs for research
  4. Clone products for research

mRNA/cDNA for PTGES3P1 Gene

1 REFSEQ mRNAs :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PTGES3P1 Gene

No ASD Table

Relevant External Links for PTGES3P1 Gene

GeneLoc Exon Structure for
PTGES3P1

Expression for PTGES3P1 Gene

Products:

  1. Primer products for research

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PTGES3P1 Gene

mRNA expression in normal human tissues for PTGES3P1 Gene
mRNA expression by GTEx for PTGES3P1 Gene

mRNA differential expression in normal tissues according to GTEx for PTGES3P1 Gene

This gene is overexpressed in Whole Blood (x4.7).
genes like me logo Genes that share expression patterns with PTGES3P1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PTGES3P1 Gene

Orthologs for PTGES3P1 Gene

Evolution for PTGES3P1 Gene

ENSEMBL:
Gene Tree for PTGES3P1 (if available)
TreeFam:
Gene Tree for PTGES3P1 (if available)

No data available for Orthologs for PTGES3P1 Gene

Paralogs for PTGES3P1 Gene

No data available for Paralogs for PTGES3P1 Gene

Variants for PTGES3P1 Gene

Additional Variant Information for PTGES3P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PTGES3P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PTGES3P1 Gene

Disorders for PTGES3P1 Gene

No disorders were found for PTGES3P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PTGES3P1 Gene

Publications for PTGES3P1 Gene

  1. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3

No data available for Mastermind for PTGES3P1 Gene

Products for PTGES3P1 Gene

Sources for PTGES3P1 Gene