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Aliases for PSMC6P1 Gene

Aliases for PSMC6P1 Gene

  • Proteasome 26S Subunit, ATPase, 6 Pseudogene 1 2 3
  • Proteasome (Prosome, Macropain) 26S Subunit, ATPase, 6 Pseudogene 2 3
  • Proteasome 26S ATPase Subunit 6 Pseudogene 3
  • AC046176.1 5
  • PSMC6P 3

External Ids for PSMC6P1 Gene

Previous HGNC Symbols for PSMC6P1 Gene

  • PSMC6P

Previous GeneCards Identifiers for PSMC6P1 Gene

  • GC08M057125
  • GC08M056963

Summaries for PSMC6P1 Gene

GeneCards Summary for PSMC6P1 Gene

PSMC6P1 (Proteasome 26S Subunit, ATPase, 6 Pseudogene 1) is a Pseudogene.

Additional gene information for PSMC6P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PSMC6P1 Gene

Genomics for PSMC6P1 Gene

GeneHancer (GH) Regulatory Elements for PSMC6P1 Gene

Promoters and enhancers for PSMC6P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I056072 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 9.2 -22.9 -22904 2.7 MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC RPS20 PIR49149 SNORD54 GC08M056077 GC08M056076 GC08M056075 CERNA3 TGS1 RNA5SP265 PSMC6P1
GH08I055987 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 8.4 +59.9 59872 7.1 HDGF PKNOX1 FOXA2 SMAD1 SIN3A IRF4 ZNF207 ATF7 FOS RUNX3 LYN TMEM68 TGS1 RPS20 PSMC6P1 RN7SL798P GC08P056003
GH08I055970 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 6.3 +77.7 77697 6.2 HDGF PKNOX1 BATF IRF4 RAD21 ZBTB40 ZNF143 ZNF207 ATF7 ETV6 LYN TGS1 RPS20 PSMC6P1 RN7SL798P GC08P055943
GH08I056013 Enhancer 0.9 dbSUPER 6.7 +37.3 37253 0.7 HDAC1 ARNT CHAMP1 TCF12 ZNF766 GATA2 ATF7 ZBTB2 ZBTB11 NCOA1 PSMC6P1 RN7SL323P GC08P056003 LYN
GH08I056010 Enhancer 0.8 ENCODE dbSUPER 7.2 +40.4 40449 0.2 CTCF PKNOX1 TRIM22 MAX REST MNT RAD21 GATA3 KLF16 SMC3 PSMC6P1 GC08P056003 RN7SL323P LYN
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PSMC6P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PSMC6P1 Gene

Genomic Locations for PSMC6P1 Gene
chr8:56,049,681-56,051,216
(GRCh38/hg38)
Size:
1,536 bases
Orientation:
Minus strand
chr8:56,962,240-56,963,775
(GRCh37/hg19)

Genomic View for PSMC6P1 Gene

Genes around PSMC6P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PSMC6P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PSMC6P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PSMC6P1 Gene

Proteins for PSMC6P1 Gene

Post-translational modifications for PSMC6P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PSMC6P1 Gene

Domains & Families for PSMC6P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PSMC6P1 Gene

Function for PSMC6P1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PSMC6P1 Gene

Localization for PSMC6P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PSMC6P1 Gene

Pathways & Interactions for PSMC6P1 Gene

SuperPathways for PSMC6P1 Gene

No Data Available

Interacting Proteins for PSMC6P1 Gene

Gene Ontology (GO) - Biological Process for PSMC6P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PSMC6P1 Gene

Drugs & Compounds for PSMC6P1 Gene

No Compound Related Data Available

Transcripts for PSMC6P1 Gene

mRNA/cDNA for PSMC6P1 Gene

(13) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PSMC6P1 Gene

No ASD Table

Relevant External Links for PSMC6P1 Gene

GeneLoc Exon Structure for
PSMC6P1
ECgene alternative splicing isoforms for
PSMC6P1

Expression for PSMC6P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PSMC6P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of PSMC6P1 Gene:

PSMC6P1
genes like me logo Genes that share expression patterns with PSMC6P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PSMC6P1 Gene

Orthologs for PSMC6P1 Gene

Evolution for PSMC6P1 Gene

ENSEMBL:
Gene Tree for PSMC6P1 (if available)
TreeFam:
Gene Tree for PSMC6P1 (if available)

No data available for Orthologs for PSMC6P1 Gene

Paralogs for PSMC6P1 Gene

No data available for Paralogs for PSMC6P1 Gene

Variants for PSMC6P1 Gene

Additional Variant Information for PSMC6P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PSMC6P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PSMC6P1 Gene

Disorders for PSMC6P1 Gene

Additional Disease Information for PSMC6P1

No disorders were found for PSMC6P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PSMC6P1 Gene

Publications for PSMC6P1 Gene

  1. Amplification of MGC2177, PLAG1, PSMC6P, and LYN in a malignant mixed tumor of salivary gland detected by cDNA microarray with tyramide signal amplification. (PMID: 15262430) Tsang YT … Wong KK (Cancer genetics and cytogenetics 2004) 3 58

Products for PSMC6P1 Gene

Sources for PSMC6P1 Gene

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