Aliases for PSIP1P1 Gene

Aliases for PSIP1P1 Gene

  • PC4 And SFRS1 Interacting Protein 1 Pseudogene 1 2 3 5
  • PC4 And SFRS1 Interacting Protein 1 Pseudogene 2
  • PC4 And SFRS1 Interacting Protein Pseudogene 3
  • PSIP1P1 5
  • PSIP1P 3

External Ids for PSIP1P1 Gene

Previous HGNC Symbols for PSIP1P1 Gene

  • PSIP1P

Summaries for PSIP1P1 Gene

GeneCards Summary for PSIP1P1 Gene

PSIP1P1 (PC4 And SFRS1 Interacting Protein 1 Pseudogene 1) is a Pseudogene.

Additional gene information for PSIP1P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PSIP1P1 Gene

Genomics for PSIP1P1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PSIP1P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J014538 Enhancer 0.6 ENCODE 10.4 -516.3 -516289 0.2 ZNF592 TAL1 HDAC2 TCF12 TEAD4 DPF2 ARID1B FOS SOX6 FOXK2 ENSG00000215237 PSIP1 PSIP1P1 ENSG00000225472 HSALNG0070098-001 NFIB ZDHHC21
GH09J015080 Enhancer 0.9 ENCODE 0.3 +25.3 25261 0.2 CEBPA MXD4 FOXA1 HOMEZ THAP11 FOXA2 MAFF SMAD4 SAP130 ETV4 SNAPC3 ZDHHC21 CCDC171 piR-57135-112 PSIP1P1 lnc-TTC39B-4 CLCN3P1 FREM1 TTC39B
GH09J015085 Enhancer 0.7 Ensembl ENCODE CraniofacialAtlas 0.3 +31.5 31548 2.2 POLR2A CHD2 ZNF512 FREM1 TTC39B piR-57135-112 PSIP1P1 CLCN3P1 lnc-TTC39B-4
GH09J015081 Enhancer 0.5 ENCODE 0.3 +26.6 26601 0.2 RARA GABPB1 TEAD3 BCL6 SOX5 SOX13 ZNF384 GATAD2A GABPA piR-57135-112 PSIP1P1 lnc-TTC39B-4 CLCN3P1 FREM1 TTC39B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PSIP1P1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PSIP1P1 Gene

Latest Assembly
chr9:15,054,967-15,056,600
(GRCh38/hg38)
Size:
1,634 bases
Orientation:
Plus strand

Previous Assembly
chr9:15,054,965-15,056,598
(GRCh37/hg19 by Entrez Gene)
Size:
1,634 bases
Orientation:
Plus strand

chr9:15,055,055-15,056,050
(GRCh37/hg19 by Ensembl)
Size:
996 bases
Orientation:
Plus strand

Genomic View for PSIP1P1 Gene

Genes around PSIP1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PSIP1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PSIP1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PSIP1P1 Gene

Proteins for PSIP1P1 Gene

Post-translational modifications for PSIP1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PSIP1P1 Gene

Domains & Families for PSIP1P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PSIP1P1 Gene

Function for PSIP1P1 Gene

Phenotypes From GWAS Catalog for PSIP1P1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PSIP1P1 Gene

Localization for PSIP1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PSIP1P1 Gene

Pathways & Interactions for PSIP1P1 Gene

PathCards logo

SuperPathways for PSIP1P1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PSIP1P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PSIP1P1 Gene

Drugs & Compounds for PSIP1P1 Gene

No Compound Related Data Available

Transcripts for PSIP1P1 Gene

mRNA/cDNA for PSIP1P1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PSIP1P1 Gene

No ASD Table

Relevant External Links for PSIP1P1 Gene

GeneLoc Exon Structure for
PSIP1P1

Expression for PSIP1P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PSIP1P1 Gene

genes like me logo Genes that share expression patterns with PSIP1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PSIP1P1 Gene

Orthologs for PSIP1P1 Gene

Evolution for PSIP1P1 Gene

ENSEMBL:
Gene Tree for PSIP1P1 (if available)
TreeFam:
Gene Tree for PSIP1P1 (if available)
Alliance of Genome Resources:
Additional Orthologs for PSIP1P1

No data available for Orthologs for PSIP1P1 Gene

Paralogs for PSIP1P1 Gene

No data available for Paralogs for PSIP1P1 Gene

Variants for PSIP1P1 Gene

Additional Variant Information for PSIP1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PSIP1P1
Leiden Open Variation Database (LOVD)
PSIP1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PSIP1P1 Gene

Disorders for PSIP1P1 Gene

No disorders were found for PSIP1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PSIP1P1 Gene

Publications for PSIP1P1 Gene

  1. Genome-wide association study of a heart failure related metabolomic profile among African Americans in the Atherosclerosis Risk in Communities (ARIC) study. (PMID: 23934736) Yu B … Boerwinkle E (Genetic epidemiology 2013) 3
  2. Common variants in the calcium-sensing receptor gene are associated with total serum calcium levels. (PMID: 20705733) O'Seaghdha CM … Köttgen A (Human molecular genetics 2010) 40

Products for PSIP1P1 Gene

Sources for PSIP1P1 Gene