Aliases for PRXL2AP1 Gene

Aliases for PRXL2AP1 Gene

  • Peroxiredoxin Like 2A Pseudogene 1 2 3 5
  • Family With Sequence Similarity 213 Member A Pseudogene 1 2 3
  • FAM213AP1 3
  • PRXL2AP1 5

External Ids for PRXL2AP1 Gene

Previous HGNC Symbols for PRXL2AP1 Gene

  • FAM213AP1

Summaries for PRXL2AP1 Gene

GeneCards Summary for PRXL2AP1 Gene

PRXL2AP1 (Peroxiredoxin Like 2A Pseudogene 1) is a Pseudogene.

Additional gene information for PRXL2AP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PRXL2AP1 Gene

Genomics for PRXL2AP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PRXL2AP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J078127 Enhancer 0.3 Ensembl 0.7 +3.8 3803 0.4 FOXA1 PRXL2AP1 lnc-E2F7-8 ENSG00000258225 SYT1 NAV3
GH12J078148 Enhancer 0.4 Ensembl 0.4 -18.1 -18097 1.4 JUND MAFK GATA2 POLR2A PRXL2AP1 ENSG00000258225 NAV3 SYT1
GH12J078184 Enhancer 0.5 Ensembl 0.2 -54.0 -53997 1.6 ATF2 JUND JUN CREB1 POLR2A ATF7 EP300 FOS CEBPB ENSG00000258225 PRXL2AP1 SYT1 NAV3
GH12J078157 Enhancer 0.4 FANTOM5 Ensembl 0.3 -26.5 -26477 0.6 PRXL2AP1 ENSG00000258225 SYT1 NAV3
GH12J078146 Enhancer 0.3 Ensembl 0.4 -15.9 -15897 0.2 CTCF PRXL2AP1 ENSG00000258225 NAV3 SYT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PRXL2AP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PRXL2AP1 Gene

Latest Assembly
chr12:78,130,333-78,131,004
(GRCh38/hg38)
Size:
672 bases
Orientation:
Minus strand

Previous Assembly
chr12:78,524,113-78,524,775
(GRCh37/hg19 by Entrez Gene)
Size:
663 bases
Orientation:
Minus strand

chr12:78,524,117-78,524,784
(GRCh37/hg19 by Ensembl)
Size:
668 bases
Orientation:
Minus strand

Genomic View for PRXL2AP1 Gene

Genes around PRXL2AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PRXL2AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRXL2AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRXL2AP1 Gene

Proteins for PRXL2AP1 Gene

Post-translational modifications for PRXL2AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PRXL2AP1 Gene

Domains & Families for PRXL2AP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PRXL2AP1 Gene

Function for PRXL2AP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRXL2AP1 Gene

Localization for PRXL2AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRXL2AP1 Gene

Pathways & Interactions for PRXL2AP1 Gene

PathCards logo

SuperPathways for PRXL2AP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PRXL2AP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PRXL2AP1 Gene

Drugs & Compounds for PRXL2AP1 Gene

No Compound Related Data Available

Transcripts for PRXL2AP1 Gene

mRNA/cDNA for PRXL2AP1 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PRXL2AP1 Gene

No ASD Table

Relevant External Links for PRXL2AP1 Gene

GeneLoc Exon Structure for
PRXL2AP1

Expression for PRXL2AP1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRXL2AP1 Gene

Orthologs for PRXL2AP1 Gene

Evolution for PRXL2AP1 Gene

ENSEMBL:
Gene Tree for PRXL2AP1 (if available)
TreeFam:
Gene Tree for PRXL2AP1 (if available)
Alliance of Genome Resources:
Additional Orthologs for PRXL2AP1

No data available for Orthologs for PRXL2AP1 Gene

Paralogs for PRXL2AP1 Gene

No data available for Paralogs for PRXL2AP1 Gene

Variants for PRXL2AP1 Gene

Additional Variant Information for PRXL2AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PRXL2AP1
Leiden Open Variation Database (LOVD)
PRXL2AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PRXL2AP1 Gene

Disorders for PRXL2AP1 Gene

No disorders were found for PRXL2AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PRXL2AP1 Gene

Publications for PRXL2AP1 Gene

No publications were found for PRXL2AP1 Gene.

No data available for Mastermind for PRXL2AP1 Gene

Products for PRXL2AP1 Gene

Sources for PRXL2AP1 Gene