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Aliases for PRSS40A Gene

Aliases for PRSS40A Gene

  • Serine Protease 40A 2 3 5
  • TISP43 3

External Ids for PRSS40A Gene

Summaries for PRSS40A Gene

GeneCards Summary for PRSS40A Gene

PRSS40A (Serine Protease 40A) is a Pseudogene. An important paralog of this gene is PRSS40B.

Additional gene information for PRSS40A Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PRSS40A Gene

Genomics for PRSS40A Gene

GeneHancer (GH) Regulatory Elements for PRSS40A Gene

Promoters and enhancers for PRSS40A Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J130570 Promoter 0.5 EPDnew 650.7 0.0 -44 0.1 GC02P130573 PRSS40A PIR35838
GH02J130573 Promoter 0.5 EPDnew 0.7 +2.5 2461 0.1 PIR35838 GC02P130573 PRSS40A PIR39319
GH02J130580 Enhancer 0.2 dbSUPER 0.4 +10.3 10308 0.7 PIR39319 PIR35838 GC02M130576 GC02P130573 PRSS40A
GH02J130583 Enhancer 0.2 dbSUPER 0.4 +13.3 13328 0.9 PIR39319 ENSG00000232408 GC02M130576 GC02P130573 PRSS40A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PRSS40A on UCSC Golden Path with GeneCards custom track

Genomic Locations for PRSS40A Gene

Genomic Locations for PRSS40A Gene
chr2:130,570,829-130,584,161
(GRCh38/hg38)
Size:
13,333 bases
Orientation:
Plus strand
chr2:131,328,402-131,341,734
(GRCh37/hg19)
Size:
13,333 bases
Orientation:
Plus strand

Genomic View for PRSS40A Gene

Genes around PRSS40A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PRSS40A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRSS40A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRSS40A Gene

Proteins for PRSS40A Gene

  • Protein details for PRSS40A Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B9A019-B9A019_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    B9A019

    Protein attributes for PRSS40A Gene

    Size:
    99 amino acids
    Molecular mass:
    11411 Da
    Quaternary structure:
    No Data Available
  • Protein details for PRSS40A Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A096LNJ3-A0A096LNJ3_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A096LNJ3

    Protein attributes for PRSS40A Gene

    Size:
    149 amino acids
    Molecular mass:
    16601 Da
    Quaternary structure:
    No Data Available
  • Protein details for PRSS40A Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    H7C364-H7C364_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    H7C364

    Protein attributes for PRSS40A Gene

    Size:
    141 amino acids
    Molecular mass:
    15713 Da
    Quaternary structure:
    No Data Available
  • Protein details for PRSS40A Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B9A030-B9A030_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    B9A030

    Protein attributes for PRSS40A Gene

    Size:
    160 amino acids
    Molecular mass:
    17646 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PRSS40A Gene

Post-translational modifications for PRSS40A Gene

No Post-translational modifications

Other Protein References for PRSS40A Gene

No data available for DME Specific Peptides for PRSS40A Gene

Domains & Families for PRSS40A Gene

Gene Families for PRSS40A Gene

Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for PRSS40A Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with PRSS40A: view

No data available for Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PRSS40A Gene

Function for PRSS40A Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRSS40A Gene

Localization for PRSS40A Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRSS40A Gene

Pathways & Interactions for PRSS40A Gene

SuperPathways for PRSS40A Gene

No Data Available

Interacting Proteins for PRSS40A Gene

Gene Ontology (GO) - Biological Process for PRSS40A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA --
genes like me logo Genes that share ontologies with PRSS40A: view

No data available for Pathways by source and SIGNOR curated interactions for PRSS40A Gene

Drugs & Compounds for PRSS40A Gene

No Compound Related Data Available

Transcripts for PRSS40A Gene

mRNA/cDNA for PRSS40A Gene

(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PRSS40A Gene

No ASD Table

Relevant External Links for PRSS40A Gene

GeneLoc Exon Structure for
PRSS40A
ECgene alternative splicing isoforms for
PRSS40A

Expression for PRSS40A Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRSS40A Gene

Orthologs for PRSS40A Gene

Evolution for PRSS40A Gene

ENSEMBL:
Gene Tree for PRSS40A (if available)
TreeFam:
Gene Tree for PRSS40A (if available)

No data available for Orthologs for PRSS40A Gene

Paralogs for PRSS40A Gene

Paralogs for PRSS40A Gene

Pseudogenes.org Pseudogenes for PRSS40A Gene

genes like me logo Genes that share paralogs with PRSS40A: view

Variants for PRSS40A Gene

Sequence variations from dbSNP and Humsavar for PRSS40A Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1002612022 -- 130,575,162(+) G/A/C intron_variant
rs1002665829 -- 130,579,002(+) C/T intron_variant
rs1005013620 -- 130,581,138(+) G/A intron_variant
rs1009920380 -- 130,577,622(+) C/T intron_variant
rs1010278758 -- 130,574,642(+) G/A intron_variant

Structural Variations from Database of Genomic Variants (DGV) for PRSS40A Gene

Variant ID Type Subtype PubMed ID
dgv2032n106 OTHER inversion 24896259
dgv2035n106 CNV duplication 24896259
dgv4074n100 CNV gain 25217958
esv2759092 CNV gain+loss 17122850
esv3584076 CNV loss 25503493
esv3592455 CNV loss 21293372
nsv1005664 CNV loss 25217958
nsv1072452 CNV deletion 25765185
nsv1072453 CNV deletion 25765185
nsv1118879 CNV deletion 24896259
nsv1147463 OTHER inversion 26484159
nsv1148026 CNV duplication 26484159
nsv428403 CNV loss 18775914
nsv583134 CNV loss 21841781
nsv7327 OTHER inversion 18451855
nsv953164 CNV deletion 24416366
nsv961509 CNV duplication 23825009

Additional Variant Information for PRSS40A Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PRSS40A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for PRSS40A Gene

Disorders for PRSS40A Gene

Additional Disease Information for PRSS40A

No disorders were found for PRSS40A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PRSS40A Gene

Publications for PRSS40A Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for PRSS40A Gene

Sources for PRSS40A Gene

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