Aliases for PRRX2-AS1 Gene

Data sources for PRRX2-AS1 Gene:

RNA type for PRRX2-AS1 Gene


Aliases for PRRX2-AS1 Gene

External Ids for PRRX2-AS1 Gene

Summaries for PRRX2-AS1 Gene

GeneCards Summary for PRRX2-AS1 Gene

PRRX2-AS1 (PRRX2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PRRX2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PRRX2-AS1 Gene

Genomics for PRRX2-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PRRX2-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PRRX2-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PRRX2-AS1 Gene

Latest Assembly
13,115 bases
Minus strand

Previous Assembly
(GRCh37/hg19 by Entrez Gene)
5,813 bases
Minus strand

(GRCh37/hg19 by Ensembl)
5,740 bases
Minus strand

Genomic View for PRRX2-AS1 Gene

Genes around PRRX2-AS1 on UCSC Golden Path with GeneCards custom track
PRRX2-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
PRRX2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRRX2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRRX2-AS1 Gene

Proteins for PRRX2-AS1 Gene

Post-translational modifications for PRRX2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PRRX2-AS1 Gene

Domains & Families for PRRX2-AS1 Gene

Gene Families for PRRX2-AS1 Gene

genes like me logo Genes that share domains with PRRX2-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PRRX2-AS1 Gene

Function for PRRX2-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRRX2-AS1 Gene

Localization for PRRX2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRRX2-AS1 Gene

Pathways & Interactions for PRRX2-AS1 Gene

PathCards logo

SuperPathways for PRRX2-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PRRX2-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PRRX2-AS1 Gene

Drugs & Compounds for PRRX2-AS1 Gene

No Compound Related Data Available

Transcripts for PRRX2-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for PRRX2-AS1 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00008E39F9_9606 lncRNA 502 2

RefSeq: NR_132102,

LNCipedia: PRRX2-AS1:3,

URS000008BF97_9606 lncRNA 431 2

Ensembl: ENST00000440413 (view in UCSC) ,

LNCipedia: PRRX2-AS1:2,

URS00008B6749_9606 lncRNA 445 2

LNCipedia: PRRX2-AS1:1,


URS0001BF2F16_9606 lncRNA 1901 1

LncBook: HSALNT0156050,

URS0001BD51D7_9606 lncRNA 1554 1

LncBook: HSALNT0156049,

PRRX2-AS1 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for PRRX2-AS1 Gene

3 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for PRRX2-AS1 Gene

No ASD Table

Relevant External Links for PRRX2-AS1 Gene

GeneLoc Exon Structure for

Expression for PRRX2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PRRX2-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PRRX2-AS1

genes like me logo Genes that share expression patterns with PRRX2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRRX2-AS1 Gene

Orthologs for PRRX2-AS1 Gene

Evolution for PRRX2-AS1 Gene

Gene Tree for PRRX2-AS1 (if available)
Gene Tree for PRRX2-AS1 (if available)
Alliance of Genome Resources:
Additional Orthologs for PRRX2-AS1

No data available for Orthologs for PRRX2-AS1 Gene

Paralogs for PRRX2-AS1 Gene

No data available for Paralogs for PRRX2-AS1 Gene

Variants for PRRX2-AS1 Gene

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for PRRX2-AS1 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for PRRX2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
Leiden Open Variation Database (LOVD)

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PRRX2-AS1 Gene

Disorders for PRRX2-AS1 Gene

Additional Disease Information for PRRX2-AS1

No disorders were found for PRRX2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PRRX2-AS1 Gene

Publications for PRRX2-AS1 Gene

No publications were found for PRRX2-AS1 Gene.

Products for PRRX2-AS1 Gene

Sources for PRRX2-AS1 Gene