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PRKG1-AS1 (PRKG1 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class. Diseases associated with PRKG1-AS1 include Rigid Spine Muscular Dystrophy 1.
GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
---|---|---|---|---|---|---|---|---|---|---|
GH10J052312 | Promoter/Enhancer | 2.4 | EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER | 600.1 | +108.4 | 108357 | 9.1 | HNRNPL CREB1 CTCF ATF7 PRDM10 ZNF629 SOX13 KDM1A ZNF692 ZNF7 | DKK1 PRKG1-AS1 MBL2 piR-37026-063 | |
GH10J052424 | Enhancer | 0.5 | Ensembl | 600.7 | +1.9 | 1914 | 0.2 | TOE1 CEBPB RAD51 ZBTB17 USF2 ZNF366 FOS | PRKG1-AS1 LNCAROD THAP12P3 DKK1 MBL2 | |
GH10J052423 | Enhancer | 0.4 | FANTOM5 | 600.7 | +1.6 | 1590 | 0.2 | CEBPB FOS USF2 | PRKG1-AS1 THAP12P3 DKK1 MBL2 | |
GH10J052425 | Enhancer | 0.2 | Ensembl | 600.7 | +0.2 | 214 | 0.4 | PRKG1-AS1 THAP12P3 DKK1 MBL2 | ||
GH10J052484 | Enhancer | 1.2 | FANTOM5 Ensembl ENCODE dbSUPER | 12 | -61.3 | -61307 | 5.4 | CTCF RAD21 JUND CEBPB JUN SMC3 EP300 FOSL2 RFX5 BHLHE40 | lnc-DKK1-5 DKK1 PRKG1-AS1 LNCAROD MBL2 |
RNAcentral Transcript ID | Subcategory | Length (nts) | # of Sources | Source Identifiers and Annotations |
---|---|---|---|---|
URS000047E0F3_9606 | lncRNA | 1111 | 4 |
Ensembl: ENST00000426785 (view in UCSC) , LncBook: HSALNT0162734, LNCipedia: PRKG1-AS1:9, NONCODE: NONHSAT013421.2, |
URS000055EF1E_9606 | lncRNA | 971 | 4 |
Ensembl: ENST00000420193 (view in UCSC) , LncBook: HSALNT0162742, LNCipedia: PRKG1-AS1:3, NONCODE: NONHSAT139977.2, |
URS000075EB1A_9606 | lncRNA | 2253 | 2 |
HGNC: 45029, RefSeq: NR_038277, |
URS0000EF31C0_9606 | lncRNA | 2977 | 1 |
Ensembl: ENST00000658196 (view in UCSC) , |
URS0000DB8FC2_9606 | lncRNA | 2215 | 1 |
Ensembl: ENST00000649494 (view in UCSC) , |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv99e201 | CNV | deletion | 23290073 |
esv2051136 | CNV | deletion | 18987734 |
esv2669039 | CNV | deletion | 23128226 |
esv2736829 | CNV | deletion | 23290073 |
esv2736851 | CNV | deletion | 23290073 |
esv275139 | CNV | loss | 21479260 |
esv3623245 | CNV | loss | 21293372 |
nsv1045692 | CNV | gain | 25217958 |
nsv1147350 | CNV | deletion | 26484159 |
Disorder | Aliases | PubMed IDs |
---|---|---|
rigid spine muscular dystrophy 1 |
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