Aliases for PRKCA-AS1 Gene

Subcategory (RNA class) for PRKCA-AS1 Gene


Number of RNA Genes sources:

3 / 17

Aliases for PRKCA-AS1 Gene

  • PRKCA Antisense RNA 1 2 3 5
  • PRKCA-AS1 2 5 165
  • NONHSAG022546.2 91
  • HSALNG0118244 164

External Ids for PRKCA-AS1 Gene

Summaries for PRKCA-AS1 Gene

GeneCards Summary for PRKCA-AS1 Gene

PRKCA-AS1 (PRKCA Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PRKCA-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PRKCA-AS1 Gene

Genomics for PRKCA-AS1 Gene

GeneHancer (GH) Regulatory Elements Pubs

GeneHancers around PRKCA-AS1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PRKCA-AS1 Gene

Genomic Locations for PRKCA-AS1 Gene
18,786 bases
Minus strand
18,786 bases
Minus strand

Genomic View for PRKCA-AS1 Gene

Genes around PRKCA-AS1 on UCSC Golden Path with GeneCards custom track
PRKCA-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
PRKCA-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRKCA-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRKCA-AS1 Gene

Proteins for PRKCA-AS1 Gene

Post-translational modifications for PRKCA-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PRKCA-AS1 Gene

Domains & Families for PRKCA-AS1 Gene

Gene Families for PRKCA-AS1 Gene

genes like me logo Genes that share domains with PRKCA-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PRKCA-AS1 Gene

Function for PRKCA-AS1 Gene

Phenotypes From GWAS Catalog for PRKCA-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRKCA-AS1 Gene

Localization for PRKCA-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRKCA-AS1 Gene

Pathways & Interactions for PRKCA-AS1 Gene

PathCards logo

SuperPathways for PRKCA-AS1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PRKCA-AS1 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PRKCA-AS1 Gene

Drugs & Compounds for PRKCA-AS1 Gene

No Compound Related Data Available

Transcripts for PRKCA-AS1 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for PRKCA-AS1 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000050EDF_9606 lncRNA 2113 3

Ensembl: ENST00000584715 (view in UCSC) ,

LNCipedia: PRKCA-AS1:1,


URS000058F076_9606 lncRNA 616 3

Ensembl: ENST00000584614 (view in UCSC) ,

LNCipedia: PRKCA-AS1:4,


URS00005B0C8D_9606 lncRNA 467 3

Ensembl: ENST00000583421 (view in UCSC) ,

LncBook: HSALNT0244090,

LNCipedia: PRKCA-AS1:3,

URS000075E50B_9606 lncRNA 1356 2

HGNC: 51347,

RefSeq: NR_110822,

URS00009BFDD2_9606 lncRNA 1356 2

LNCipedia: PRKCA-AS1:2,


PRKCA-AS1 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Additional transcripts not in RNAcentral for PRKCA-AS1 Gene

4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for PRKCA-AS1 Gene

No ASD Table

Relevant External Links for PRKCA-AS1 Gene

GeneLoc Exon Structure for

Expression for PRKCA-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PRKCA-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PRKCA-AS1

genes like me logo Genes that share expression patterns with PRKCA-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRKCA-AS1 Gene

Orthologs for PRKCA-AS1 Gene

Evolution for PRKCA-AS1 Gene

Gene Tree for PRKCA-AS1 (if available)
Gene Tree for PRKCA-AS1 (if available)

No data available for Orthologs for PRKCA-AS1 Gene

Paralogs for PRKCA-AS1 Gene

No data available for Paralogs for PRKCA-AS1 Gene

Variants for PRKCA-AS1 Gene

Additional dbSNP identifiers (rs#s) for PRKCA-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for PRKCA-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv5750n54 CNV loss 21841781
esv3582875 CNV loss 25503493
esv3582876 CNV loss 25503493
nsv1064970 CNV loss 25217958
nsv1120054 OTHER inversion 24896259
nsv457881 CNV loss 19166990
nsv457882 CNV loss 19166990
nsv457887 CNV loss 19166990
nsv470597 CNV loss 18288195
nsv575894 CNV loss 21841781
nsv575895 CNV loss 21841781
nsv575896 CNV loss 21841781
nsv833520 CNV gain 17160897

Additional Variant Information for PRKCA-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP and Variation tolerance for PRKCA-AS1 Gene

Disorders for PRKCA-AS1 Gene

No disorders were found for PRKCA-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PRKCA-AS1 Gene

Publications for PRKCA-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3
  2. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3

Products for PRKCA-AS1 Gene

Sources for PRKCA-AS1 Gene