Aliases for PRKAR1B-AS2 Gene

Subcategory (RNA class) for PRKAR1B-AS2 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for PRKAR1B-AS2 Gene

  • PRKAR1B Antisense RNA 2 2 3
  • Novel Transcript 5
  • HSALNG0055549 167
  • NONHSAG046736 92
  • Lnc-DNAAF5-2 168
  • PRKAR1B-AS2 2
  • AC147651.2 5

External Ids for PRKAR1B-AS2 Gene

Summaries for PRKAR1B-AS2 Gene

GeneCards Summary for PRKAR1B-AS2 Gene

PRKAR1B-AS2 (PRKAR1B Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PRKAR1B-AS2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PRKAR1B-AS2 Gene

Genomics for PRKAR1B-AS2 Gene

GeneHancer (GH) Regulatory Elements for PRKAR1B-AS2 Gene

Promoters and enhancers for PRKAR1B-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J000561 Enhancer 0.8 Ensembl ENCODE dbSUPER 500.7 +0.4 373 1.6 ZIC2 GATAD2B PAX8 GLIS1 CTCF KDM1A ZSCAN4 MNT PRKAR1B-AS2 lnc-DNAAF5-4 PRKAR1B
GH07J000560 Enhancer 0.2 Ensembl 500.7 -0.8 -780 0.2 PRKAR1B-AS2 PDGFA PRKAR1B
GH07J000587 Enhancer 0.9 FANTOM5 ENCODE dbSUPER 13.4 +26.3 26345 1.2 NR2F2 BHLHE40 CDC5L CREB1 SP1 USF2 PRKAR1B-AS2 HRAT92 PDGFA PRKAR1B RF00017-5947 RF00017-5948
GH07J000592 Enhancer 0.8 dbSUPER 13.4 +31.2 31159 0.6 ZBTB11 NCOR1 NFRKB RELA ZNF316 ARNT CREB3L1 POLR2G ZNF592 RBBP5 PRKAR1B-AS2 HRAT92 PDGFA ENSG00000237181 RF00017-5948 RF00017-5947 PRKAR1B
GH07J000485 Enhancer 0.8 FANTOM5 dbSUPER 11.9 -75.6 -75595 0.1 ZIC2 ZNF341 MNT KLF17 GLIS1 KLF1 TEAD3 MAZ MAX RBM39 HRAT92 PRKAR1B-AS2 PDGFA GET4 lnc-FAM20C-12 RF00017-5946 ENSG00000234471
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PRKAR1B-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PRKAR1B-AS2 Gene

Genomic Locations for PRKAR1B-AS2 Gene
chr7:561,481-566,230
(GRCh38/hg38)
Size:
4,750 bases
Orientation:
Plus strand
chr7:601,595-605,256
(GRCh37/hg19)
Size:
3,662 bases
Orientation:
Plus strand

Genomic View for PRKAR1B-AS2 Gene

Genes around PRKAR1B-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PRKAR1B-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRKAR1B-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRKAR1B-AS2 Gene

Proteins for PRKAR1B-AS2 Gene

Post-translational modifications for PRKAR1B-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PRKAR1B-AS2 Gene

Domains & Families for PRKAR1B-AS2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PRKAR1B-AS2 Gene

Function for PRKAR1B-AS2 Gene

Phenotypes From GWAS Catalog for PRKAR1B-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRKAR1B-AS2 Gene

Localization for PRKAR1B-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRKAR1B-AS2 Gene

Pathways & Interactions for PRKAR1B-AS2 Gene

PathCards logo

SuperPathways for PRKAR1B-AS2 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PRKAR1B-AS2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PRKAR1B-AS2 Gene

Drugs & Compounds for PRKAR1B-AS2 Gene

No Compound Related Data Available

Transcripts for PRKAR1B-AS2 Gene

mRNA/cDNA for PRKAR1B-AS2 Gene

5 RNACentral transcripts :
1 REFSEQ mRNAs :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
2 LncBook transcripts :
3 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for PRKAR1B-AS2 Gene

No ASD Table

Relevant External Links for PRKAR1B-AS2 Gene

GeneLoc Exon Structure for
PRKAR1B-AS2

Expression for PRKAR1B-AS2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRKAR1B-AS2 Gene

Orthologs for PRKAR1B-AS2 Gene

Evolution for PRKAR1B-AS2 Gene

ENSEMBL:
Gene Tree for PRKAR1B-AS2 (if available)
TreeFam:
Gene Tree for PRKAR1B-AS2 (if available)

No data available for Orthologs for PRKAR1B-AS2 Gene

Paralogs for PRKAR1B-AS2 Gene

No data available for Paralogs for PRKAR1B-AS2 Gene

Variants for PRKAR1B-AS2 Gene

Additional dbSNP identifiers (rs#s) for PRKAR1B-AS2 Gene

Additional Variant Information for PRKAR1B-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PRKAR1B-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PRKAR1B-AS2 Gene

Disorders for PRKAR1B-AS2 Gene

No disorders were found for PRKAR1B-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PRKAR1B-AS2 Gene

Publications for PRKAR1B-AS2 Gene

No publications were found for PRKAR1B-AS2 Gene.

No data available for Mastermind for PRKAR1B-AS2 Gene

Products for PRKAR1B-AS2 Gene

Sources for PRKAR1B-AS2 Gene