Aliases for PRKAR1B-AS1 Gene

Subcategory (RNA class) for PRKAR1B-AS1 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for PRKAR1B-AS1 Gene

  • PRKAR1B Antisense RNA 1 2 3
  • PRKAR1B-AS1 2

External Ids for PRKAR1B-AS1 Gene

Summaries for PRKAR1B-AS1 Gene

GeneCards Summary for PRKAR1B-AS1 Gene

PRKAR1B-AS1 (PRKAR1B Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PRKAR1B-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PRKAR1B-AS1 Gene

Genomics for PRKAR1B-AS1 Gene

GeneHancer (GH) Regulatory Elements for PRKAR1B-AS1 Gene

Promoters and enhancers for PRKAR1B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J000600 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 +0.5 520 5.7 ZBTB40 SIN3A NRF1 SP1 GTF2E2 EP300 ZIC2 REST POLR2A ZBTB11 ENSG00000237181 PRKAR1B-AS1 DNAAF5 SUN1 PSMG3 piR-32287-067 PRKAR1B
GH07J000608 Promoter/Enhancer 1 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +6.2 6199 1.7 BHLHE40 ENSG00000237181 PSMG3 COX19 piR-32287-067 PRKAR1B-AS1 LOC105375119 PRKAR1B
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PRKAR1B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PRKAR1B-AS1 Gene

Genomic Locations for PRKAR1B-AS1 Gene
chr7:602,845-608,502
(GRCh38/hg38)
Size:
5,658 bases
Orientation:
Plus strand

Genomic View for PRKAR1B-AS1 Gene

Genes around PRKAR1B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PRKAR1B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRKAR1B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRKAR1B-AS1 Gene

Proteins for PRKAR1B-AS1 Gene

Post-translational modifications for PRKAR1B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PRKAR1B-AS1 Gene

Domains & Families for PRKAR1B-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PRKAR1B-AS1 Gene

Function for PRKAR1B-AS1 Gene

Phenotypes From GWAS Catalog for PRKAR1B-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRKAR1B-AS1 Gene

Localization for PRKAR1B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRKAR1B-AS1 Gene

Pathways & Interactions for PRKAR1B-AS1 Gene

PathCards logo

SuperPathways for PRKAR1B-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PRKAR1B-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PRKAR1B-AS1 Gene

Drugs & Compounds for PRKAR1B-AS1 Gene

No Compound Related Data Available

Transcripts for PRKAR1B-AS1 Gene

mRNA/cDNA for PRKAR1B-AS1 Gene

2 RNACentral transcripts :
2 REFSEQ mRNAs :
4 NCBI additional mRNA sequence :

Alternative Splicing Database (ASD) splice patterns (SP) for PRKAR1B-AS1 Gene

No ASD Table

Relevant External Links for PRKAR1B-AS1 Gene

GeneLoc Exon Structure for
PRKAR1B-AS1

Expression for PRKAR1B-AS1 Gene

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for PRKAR1B-AS1

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRKAR1B-AS1 Gene

Orthologs for PRKAR1B-AS1 Gene

No data available for Orthologs and Evolution for PRKAR1B-AS1 Gene

Paralogs for PRKAR1B-AS1 Gene

No data available for Paralogs for PRKAR1B-AS1 Gene

Variants for PRKAR1B-AS1 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for PRKAR1B-AS1 Gene

SNP ID Clinical significance and condition Chr 07 pos Variation AA Info Type
rs145653328 Uncertain Significance: not provided 606,205(+) T/C SYNONYMOUS_VARIANT

Additional dbSNP identifiers (rs#s) for PRKAR1B-AS1 Gene

Structural Variations from Database of Genomic Variants (DGV) for PRKAR1B-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2733637 CNV deletion 23290073

Additional Variant Information for PRKAR1B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PRKAR1B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for PRKAR1B-AS1 Gene

Disorders for PRKAR1B-AS1 Gene

No disorders were found for PRKAR1B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PRKAR1B-AS1 Gene

Publications for PRKAR1B-AS1 Gene

No publications were found for PRKAR1B-AS1 Gene.

No data available for Mastermind for PRKAR1B-AS1 Gene

Products for PRKAR1B-AS1 Gene

Sources for PRKAR1B-AS1 Gene