Aliases for PRELID3BP3 Gene

Aliases for PRELID3BP3 Gene

  • PRELI Domain Containing 3B Pseudogene 3 2 3 5
  • SLMO2 Pseudogene 3 2 3
  • Slowmo Homolog 2 (Drosophila) Pseudogene 3 2
  • Slowmo Homolog 2 Pseudogene 3 3
  • PRELID3BP3 5
  • SLMO2P3 3

External Ids for PRELID3BP3 Gene

Previous HGNC Symbols for PRELID3BP3 Gene

  • SLMO2P3

Summaries for PRELID3BP3 Gene

GeneCards Summary for PRELID3BP3 Gene

PRELID3BP3 (PRELI Domain Containing 3B Pseudogene 3) is a Pseudogene.

Additional gene information for PRELID3BP3 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PRELID3BP3 Gene

Genomics for PRELID3BP3 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PRELID3BP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J062858 Enhancer 1 Ensembl ENCODE 0.4 +19.7 19722 3.6 ZNF217 ZBTB7B HES1 MBD2 ELF1 CTBP1 CUX1 PAX8 NONO RFX5 FTSJ3 MIR633 MAP3K3 CYB561 HSALNG0117983-001 lnc-TANC2-1 PRELID3BP3 MARCHF10 TANC2
GH17J062826 Enhancer 0.8 ENCODE 0.4 -13.5 -13464 2.4 LARP7 BRCA1 ZNF217 CEBPB MAX EP300 ELF1 PRDM1 ZNF610 RAD21 DDX42 INTS2 MAP3K3 HSALNG0117981 PRELID3BP3 MARCHF10 MARCHF10-DT TANC2
GH17J062869 Enhancer 1 FANTOM5 ENCODE CraniofacialAtlas 0.3 +29.1 29142 1.9 SIX4 CTBP1 SP1 SIN3A BMI1 DPF2 RFX1 CSDE1 SUZ12 MNT RNU6-446P MRC2 HSALNG0117983-001 lnc-TANC2-1 PRELID3BP3 MARCHF10 TANC2
GH17J062856 Enhancer 0.6 ENCODE 0.4 +15.0 15037 0.2 ZNF217 CUX1 SMARCE1 DPF2 NFIB YBX1 GATAD2B ZNF687 ZHX2 RAD21 MIR633 PRELID3BP3 lnc-TANC2-1 HSALNG0117983-001 MARCHF10 TANC2
GH17J062853 Enhancer 0.4 ENCODE 0.4 +13.3 13338 1.7 ZBTB7B CTBP1 NONO SP1 MIR633 FTSJ3 PRELID3BP3 lnc-TANC2-1 HSALNG0117983-001 MARCHF10 TANC2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PRELID3BP3 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PRELID3BP3 Gene

Latest Assembly
chr17:62,841,058-62,841,835
(GRCh38/hg38)
Size:
778 bases
Orientation:
Plus strand

Previous Assembly
chr17:60,918,419-60,919,196
(GRCh37/hg19 by Entrez Gene)
Size:
778 bases
Orientation:
Plus strand

chr17:60,918,462-60,919,006
(GRCh37/hg19 by Ensembl)
Size:
545 bases
Orientation:
Plus strand

Genomic View for PRELID3BP3 Gene

Genes around PRELID3BP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PRELID3BP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PRELID3BP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PRELID3BP3 Gene

Proteins for PRELID3BP3 Gene

Post-translational modifications for PRELID3BP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PRELID3BP3 Gene

Domains & Families for PRELID3BP3 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PRELID3BP3 Gene

Function for PRELID3BP3 Gene

Phenotypes From GWAS Catalog for PRELID3BP3 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRELID3BP3 Gene

Localization for PRELID3BP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRELID3BP3 Gene

Pathways & Interactions for PRELID3BP3 Gene

PathCards logo

SuperPathways for PRELID3BP3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PRELID3BP3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PRELID3BP3 Gene

Drugs & Compounds for PRELID3BP3 Gene

No Compound Related Data Available

Transcripts for PRELID3BP3 Gene

mRNA/cDNA for PRELID3BP3 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PRELID3BP3 Gene

No ASD Table

Relevant External Links for PRELID3BP3 Gene

GeneLoc Exon Structure for
PRELID3BP3

Expression for PRELID3BP3 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRELID3BP3 Gene

Orthologs for PRELID3BP3 Gene

Evolution for PRELID3BP3 Gene

ENSEMBL:
Gene Tree for PRELID3BP3 (if available)
TreeFam:
Gene Tree for PRELID3BP3 (if available)
Alliance of Genome Resources:
Additional Orthologs for PRELID3BP3

No data available for Orthologs for PRELID3BP3 Gene

Paralogs for PRELID3BP3 Gene

No data available for Paralogs for PRELID3BP3 Gene

Variants for PRELID3BP3 Gene

Additional Variant Information for PRELID3BP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PRELID3BP3
Leiden Open Variation Database (LOVD)
PRELID3BP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PRELID3BP3 Gene

Disorders for PRELID3BP3 Gene

No disorders were found for PRELID3BP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PRELID3BP3 Gene

Publications for PRELID3BP3 Gene

No publications were found for PRELID3BP3 Gene.

No data available for Mastermind for PRELID3BP3 Gene

Products for PRELID3BP3 Gene

Sources for PRELID3BP3 Gene