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Aliases for PRELID1P6 Gene
Aliases for PRELID1P6 Gene
External Ids for PRELID1P6 Gene
- HGNC: 54771
- NCBI Entrez Gene: 388955
- Ensembl: ENSG00000228305
Previous GeneCards Identifiers for PRELID1P6 Gene
- GC02M063634
Summaries for PRELID1P6 Gene
GeneCards Summary for PRELID1P6 Gene
PRELID1P6 (PRELID1 Pseudogene 6) is a Pseudogene.
Additional gene information for PRELID1P6 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PRELID1P6 Gene
Genomics for PRELID1P6 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for PRELID1P6 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH02J063622 | Promoter | 0.3 | Ensembl | 250.7 | +0.5 | 508 | 1 | PRELID1P6 piR-32930-001 piR-40609-001 piR-44373-003 piR-53440-003 MDH1 ENSG00000225889 lnc-VPS54-6 WDPCP lnc-VPS54-7 | ||
| GH02J064338 | Enhancer | 0.5 | Ensembl | 4.1 | -716.1 | -716092 | 1 | ZIC2 YY1 CBFB BATF JUNB RUNX3 | MIR4433A MIR4433B lnc-LGALSL-6 ENSG00000238012 ENSG00000237217 LGALSL LGALSL-DT AFTPH PRELID1P6 ENSG00000238201 | |
| GH02J064348 | Enhancer | 0.4 | Ensembl | 4.6 | -725.9 | -725891 | 1 | FOSL1 JUND POLR2A | RPL23AP37 ENSG00000238201 PRELID1P6 lnc-LGALSL-6 RF00017-3212 LGALSL PELI1 | |
| GH02J063639 | Enhancer | 0.3 | Ensembl ENCODE | 0.4 | -16.6 | -16592 | 0.8 | lnc-VPS54-5 PRELID1P6 lnc-VPS54-6 MDH1 WDPCP lnc-VPS54-7 | ||
| GH02J063627 | Enhancer | 0.2 | Ensembl | 0.4 | -5.6 | -5592 | 1.6 | WDPCP PRELID1P6 lnc-VPS54-5 MDH1 lnc-VPS54-6 lnc-VPS54-7 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around PRELID1P6 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for PRELID1P6 Gene
Latest Assembly
- chr2:63,622,084-63,623,009
- (GRCh38/hg38)
- Size:
- 926 bases
- Orientation:
- Minus strand
Previous Assembly
- chr2:63,849,218-63,850,143
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 926 bases
- Orientation:
- Minus strand
- chr2:63,849,309-63,849,965
- (GRCh37/hg19 by Ensembl)
- Size:
- 657 bases
- Orientation:
- Minus strand
Genomic View for PRELID1P6 Gene
Genes around PRELID1P6 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 2p15 by HGNC
- 2p15 by Entrez Gene
- 2p15 by Ensembl
PRELID1P6 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for PRELID1P6 Gene
Proteins for PRELID1P6 Gene
Post-translational modifications for PRELID1P6 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for PRELID1P6
- Origene Custom Protein Services for PRELID1P6
Assay products for research
No data available for DME Specific Peptides for PRELID1P6 Gene
Domains & Families for PRELID1P6 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PRELID1P6 Gene
Function for PRELID1P6 Gene
Phenotypes From GWAS Catalog for PRELID1P6 Gene
Phenotypes for PRELID1P6 Gene
- GenomeRNAi human phenotypes for PRELID1P6:
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Browse CRISPR knockouts for PRELID1P6
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PRELID1P6 Gene
Localization for PRELID1P6 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PRELID1P6 Gene
Transcripts for PRELID1P6 Gene
mRNA/cDNA for PRELID1P6 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000436998 654 nts (view in UCSC)
CRISPR products for research
- Browse CRISPR knockouts for PRELID1P6
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for PRELID1P6 Gene
- GeneLoc Exon Structure for
- PRELID1P6
Expression for PRELID1P6 Gene
No Expression Related Data Available
Primer products for research
-
OriGene qPCR primer pairs for PRELID1P6
No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PRELID1P6 Gene
Orthologs for PRELID1P6 Gene
No data available for Orthologs for PRELID1P6 Gene
Paralogs for PRELID1P6 Gene
No data available for Paralogs for PRELID1P6 Gene
Variants for PRELID1P6 Gene
Additional Variant Information for PRELID1P6 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- PRELID1P6
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PRELID1P6 Gene
Disorders for PRELID1P6 Gene
No disorders were found for PRELID1P6 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PRELID1P6 Gene
Publications for PRELID1P6 Gene
No publications were found for PRELID1P6 Gene.
No data available for Mastermind for PRELID1P6 Gene
Products for PRELID1P6 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for PRELID1P6
- Origene Custom Protein Services for PRELID1P6
- Browse OriGene Inhibitory RNA Products For PRELID1P6
- OriGene qPCR primer pairs for PRELID1P6
- Browse CRISPR knockouts for PRELID1P6
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For PRELID1P6
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for PRELID1P6
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for PRELID1P6
- Search GeneCopoeia for miRNA 3'UTR Target clone products for PRELID1P6
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for PRELID1P6
Sources for PRELID1P6 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB