Aliases for PQLC1P2 Gene

Aliases for PQLC1P2 Gene

  • PQ Loop Repeat Containing 1 Pseudogene 2 2 3
  • PQ Loop Repeat Containing 1 (PQLC1) Pseudogene 5
  • AC073413.1 5

External Ids for PQLC1P2 Gene

Previous GeneCards Identifiers for PQLC1P2 Gene

  • GC04P083612

Summaries for PQLC1P2 Gene

GeneCards Summary for PQLC1P2 Gene

PQLC1P2 (PQ Loop Repeat Containing 1 Pseudogene 2) is a Pseudogene.

Additional gene information for PQLC1P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PQLC1P2 Gene

Genomics for PQLC1P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PQLC1P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J082691 Enhancer 0.2 Ensembl 607.2 +0.3 265 1.6 PQLC1P2 lnc-THAP9-3 MIR575 TMEM150C piR-53610 SCD5
GH04J082686 Enhancer 0.7 Ensembl ENCODE dbSUPER 7.2 -4.0 -3953 1.8 NR2F1 EBF1 MIR575 PQLC1P2 TMEM150C GPAT3 lnc-TMEM150C-6 SCD5
GH04J082674 Enhancer 0.5 dbSUPER 7 -14.8 -14780 4.4 CTBP1 CREB1 ZNF217 DPF2 ZNF24 SMARCE1 ZNF680 TMEM150C MIR575 PQLC1P2 SCD5 GPAT3 lnc-TMEM150C-6
GH04J082704 Enhancer 0.7 Ensembl ENCODE dbSUPER 4.8 +14.6 14565 2.2 FEZF1 KAT2B SMARCA4 TMEM150C MIR575 PQLC1P2 piR-53610 SCD5
GH04J082681 Enhancer 0.3 Ensembl dbSUPER 7 -9.7 -9735 0.8 MIR575 TMEM150C PQLC1P2 lnc-TMEM150C-6 SCD5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PQLC1P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PQLC1P2 Gene

Genomic Locations for PQLC1P2 Gene
chr4:82,691,736-82,692,506
(GRCh38/hg38)
Size:
771 bases
Orientation:
Plus strand
chr4:83,612,889-83,613,659
(GRCh37/hg19)
Size:
771 bases
Orientation:
Plus strand

Genomic View for PQLC1P2 Gene

Genes around PQLC1P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PQLC1P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PQLC1P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PQLC1P2 Gene

Proteins for PQLC1P2 Gene

Post-translational modifications for PQLC1P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PQLC1P2 Gene

Domains & Families for PQLC1P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PQLC1P2 Gene

Function for PQLC1P2 Gene

Phenotypes From GWAS Catalog for PQLC1P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PQLC1P2 Gene

Localization for PQLC1P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PQLC1P2 Gene

Pathways & Interactions for PQLC1P2 Gene

PathCards logo

SuperPathways for PQLC1P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PQLC1P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PQLC1P2 Gene

Drugs & Compounds for PQLC1P2 Gene

No Compound Related Data Available

Transcripts for PQLC1P2 Gene

mRNA/cDNA for PQLC1P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PQLC1P2 Gene

No ASD Table

Relevant External Links for PQLC1P2 Gene

GeneLoc Exon Structure for
PQLC1P2

Expression for PQLC1P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PQLC1P2 Gene

genes like me logo Genes that share expression patterns with PQLC1P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PQLC1P2 Gene

Orthologs for PQLC1P2 Gene

Evolution for PQLC1P2 Gene

ENSEMBL:
Gene Tree for PQLC1P2 (if available)
TreeFam:
Gene Tree for PQLC1P2 (if available)

No data available for Orthologs for PQLC1P2 Gene

Paralogs for PQLC1P2 Gene

No data available for Paralogs for PQLC1P2 Gene

Variants for PQLC1P2 Gene

Additional Variant Information for PQLC1P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PQLC1P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PQLC1P2 Gene

Disorders for PQLC1P2 Gene

No disorders were found for PQLC1P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PQLC1P2 Gene

Publications for PQLC1P2 Gene

No publications were found for PQLC1P2 Gene.

No data available for Mastermind for PQLC1P2 Gene

Products for PQLC1P2 Gene

Sources for PQLC1P2 Gene