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Aliases for PPP1R14B-AS1 Gene

Subcategory (RNA class) for PPP1R14B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

13

Aliases for PPP1R14B-AS1 Gene

  • PPP1R14B Antisense RNA 1 2 3
  • Novel Transcript 5
  • AP001453.2 5

External Ids for PPP1R14B-AS1 Gene

Summaries for PPP1R14B-AS1 Gene

GeneCards Summary for PPP1R14B-AS1 Gene

PPP1R14B-AS1 (PPP1R14B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for PPP1R14B-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PPP1R14B-AS1 Gene

Genomics for PPP1R14B-AS1 Gene

GeneHancer (GH) Regulatory Elements for PPP1R14B-AS1 Gene

Promoters and enhancers for PPP1R14B-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J064237 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 600.7 -0.1 -58 16.6 HDGF SP1 ZFX ELF3 MNT SIX5 CBFA2T2 ZNF148 NKRF POLR2A PPP1R14B PLCB3 FKBP2 PPP1R14B-AS1 TRPT1 ENSG00000236935 VEGFB ENSG00000257086 TRMT112 SF1
GH11J064215 Enhancer 0.7 Ensembl ENCODE 12.6 -30.2 -30164 0.8 CEBPA CEBPB RUNX3 ZFHX2 HLF FKBP2 PPP1R14B PPP1R14B-AS1 ENSG00000257086 PLCB3 GPR137 BAD MACROD1 CCDC88B FERMT3
GH11J063865 Promoter/Enhancer 1.5 Ensembl ENCODE dbSUPER 4.6 -377.1 -377117 5.5 ZNF384 RELA MLLT1 IKZF1 ZNF600 BACH1 IKZF2 ZIC2 CTBP1 PKNOX1 MARK2 NAA40 SPINDOC RTN3 PPP1R14B-AS1 GC11M063862 RNU6-1306P
GH11J063854 Enhancer 1.3 Ensembl ENCODE dbSUPER 4.3 -387.4 -387439 6.1 ELF3 CEBPG ZNF384 PRDM1 CREB1 ZNF300 CEBPA GATAD2A ATF1 NFKBIZ RNU6-1306P NAA40 ENSG00000256341 PLAAT3 SPINDOC PPP1R14B-AS1 GC11M063862 MARK2
GH11J063831 Enhancer 0.8 Ensembl ENCODE 4.4 -413.2 -413177 2 EGR1 HDAC2 USF1 BCOR KDM1A ZMYM3 USF2 SMARCA5 SPINDOC PPP1R14B-AS1 ENSG00000256280 GC11M063828
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PPP1R14B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PPP1R14B-AS1 Gene

Genomic Locations for PPP1R14B-AS1 Gene
chr11:64,245,377-64,248,219
(GRCh38/hg38)
Size:
2,843 bases
Orientation:
Plus strand
chr11:64,013,436-64,015,689
(GRCh37/hg19)
Size:
2,254 bases
Orientation:
Plus strand

Genomic View for PPP1R14B-AS1 Gene

Genes around PPP1R14B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PPP1R14B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PPP1R14B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PPP1R14B-AS1 Gene

Proteins for PPP1R14B-AS1 Gene

Post-translational modifications for PPP1R14B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PPP1R14B-AS1 Gene

Domains & Families for PPP1R14B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PPP1R14B-AS1 Gene

Function for PPP1R14B-AS1 Gene

Phenotypes From GWAS Catalog for PPP1R14B-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PPP1R14B-AS1 Gene

Localization for PPP1R14B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PPP1R14B-AS1 Gene

Pathways & Interactions for PPP1R14B-AS1 Gene

PathCards logo

SuperPathways for PPP1R14B-AS1 Gene

No Data Available

Interacting Proteins for PPP1R14B-AS1 Gene

Gene Ontology (GO) - Biological Process for PPP1R14B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PPP1R14B-AS1 Gene

Drugs & Compounds for PPP1R14B-AS1 Gene

No Compound Related Data Available

Transcripts for PPP1R14B-AS1 Gene

mRNA/cDNA for PPP1R14B-AS1 Gene

(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for PPP1R14B-AS1 Gene

No ASD Table

Relevant External Links for PPP1R14B-AS1 Gene

GeneLoc Exon Structure for
PPP1R14B-AS1
ECgene alternative splicing isoforms for
PPP1R14B-AS1

Expression for PPP1R14B-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PPP1R14B-AS1 Gene

Orthologs for PPP1R14B-AS1 Gene

Evolution for PPP1R14B-AS1 Gene

ENSEMBL:
Gene Tree for PPP1R14B-AS1 (if available)
TreeFam:
Gene Tree for PPP1R14B-AS1 (if available)

No data available for Orthologs for PPP1R14B-AS1 Gene

Paralogs for PPP1R14B-AS1 Gene

No data available for Paralogs for PPP1R14B-AS1 Gene

Variants for PPP1R14B-AS1 Gene

Sequence variations from dbSNP and Humsavar for PPP1R14B-AS1 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000379419 -- 64,246,632(+) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000981937 -- 64,244,972(+) G/A upstream_transcript_variant
rs1001294271 -- 64,248,222(+) CC/CCC downstream_transcript_variant
rs1001341927 -- 64,244,465(+) A/C upstream_transcript_variant
rs1001394854 -- 64,247,238(+) T/C intron_variant, non_coding_transcript_variant

Additional Variant Information for PPP1R14B-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PPP1R14B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PPP1R14B-AS1 Gene

Disorders for PPP1R14B-AS1 Gene

No disorders were found for PPP1R14B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PPP1R14B-AS1 Gene

Publications for PPP1R14B-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington JJ … Ducar M (Nature biotechnology 2001) 3 58

No data available for External Links for PPP1R14B-AS1 Gene

Products for PPP1R14B-AS1 Gene

Sources for PPP1R14B-AS1 Gene

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