Aliases for PPP1R12A-AS2 Gene

Data sources for PPP1R12A-AS2 Gene:

RNA type for PPP1R12A-AS2 Gene

lncRNA

Aliases for PPP1R12A-AS2 Gene

External Ids for PPP1R12A-AS2 Gene

Summaries for PPP1R12A-AS2 Gene

GeneCards Summary for PPP1R12A-AS2 Gene

PPP1R12A-AS2 (PPP1R12A Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PPP1R12A-AS2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PPP1R12A-AS2 Gene

Genomics for PPP1R12A-AS2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PPP1R12A-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J079725 Enhancer 0.6 Ensembl ENCODE 0.4 +10.9 10863 1.6 ATF2 CEBPB JUN FOS ATF7 PAWR PPP1R12A-AS2 HSALNG0092655 ENSG00000258048 PPP1R12A
GH12J079717 Enhancer 0.2 Ensembl 0.7 +2.1 2069 0.2 PAWR PPP1R12A-AS2 HSALNG0092654 ENSG00000258048 HSALNG0092655 PPP1R12A
GH12J079775 Enhancer 0.3 Ensembl 0.2 +61.0 60969 1.2 HOMEZ FOXP1 HSALNG0092656 lnc-PAWR-9 HSALNG0092655 PPP1R12A-AS2 PAWR ENSG00000258048 PPP1R12A
GH12J079733 Enhancer 0.2 Ensembl 0.4 +18.5 18469 0.2 PAWR PPP1R12A-AS2 HSALNG0092655 ENSG00000258048 PPP1R12A
GH12J079743 Enhancer 0.2 FANTOM5 0.3 +28.8 28774 0.3 HSALNG0092655 PPP1R12A-AS2 ENSG00000258048 PAWR PPP1R12A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PPP1R12A-AS2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PPP1R12A-AS2 Gene

Latest Assembly
chr12:79,715,232-79,778,423
(GRCh38/hg38)
Size:
63,192 bases
Orientation:
Plus strand

Genomic View for PPP1R12A-AS2 Gene

Genes around PPP1R12A-AS2 on UCSC Golden Path with GeneCards custom track
PPP1R12A-AS2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
PPP1R12A-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PPP1R12A-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PPP1R12A-AS2 Gene

Proteins for PPP1R12A-AS2 Gene

Post-translational modifications for PPP1R12A-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PPP1R12A-AS2 Gene

Domains & Families for PPP1R12A-AS2 Gene

Gene Families for PPP1R12A-AS2 Gene

genes like me logo Genes that share domains with PPP1R12A-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PPP1R12A-AS2 Gene

Function for PPP1R12A-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PPP1R12A-AS2 Gene

Localization for PPP1R12A-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PPP1R12A-AS2 Gene

Pathways & Interactions for PPP1R12A-AS2 Gene

PathCards logo

SuperPathways for PPP1R12A-AS2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for PPP1R12A-AS2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PPP1R12A-AS2 Gene

Drugs & Compounds for PPP1R12A-AS2 Gene

No Compound Related Data Available

Transcripts for PPP1R12A-AS2 Gene

PPP1R12A-AS2 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for PPP1R12A-AS2 Gene

No ASD Table

Relevant External Links for PPP1R12A-AS2 Gene

GeneLoc Exon Structure for
PPP1R12A-AS2

No data available for mRNA/cDNA for PPP1R12A-AS2 Gene

Expression for PPP1R12A-AS2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PPP1R12A-AS2 Gene

Orthologs for PPP1R12A-AS2 Gene

No data available for Orthologs and Evolution for PPP1R12A-AS2 Gene

Paralogs for PPP1R12A-AS2 Gene

No data available for Paralogs for PPP1R12A-AS2 Gene

Variants for PPP1R12A-AS2 Gene

Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP for PPP1R12A-AS2 Gene

SNP ID Clinical significance and condition Chr 12 pos Variation AA Info Type
157258 Not Provided: Gestational diabetes mellitus uncontrolled 79,761,819(+) T/TACATTTTTGTAAG
Single allele

dbSNP identifiers (rs#s) for variants without ClinVar clinical significance for PPP1R12A-AS2 Gene

All consequence types are included: molecular consequences (e.g. missense, synonymous), and location-based (e.g. intron, upstream).

Additional Variant Information for PPP1R12A-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PPP1R12A-AS2
Leiden Open Variation Database (LOVD)
PPP1R12A-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PPP1R12A-AS2 Gene

Disorders for PPP1R12A-AS2 Gene

No disorders were found for PPP1R12A-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PPP1R12A-AS2 Gene

Publications for PPP1R12A-AS2 Gene

No publications were found for PPP1R12A-AS2 Gene.

No data available for Mastermind for PPP1R12A-AS2 Gene

Products for PPP1R12A-AS2 Gene

Sources for PPP1R12A-AS2 Gene