Aliases for POU5F1P3 Gene

Aliases for POU5F1P3 Gene

  • POU Class 5 Homeobox 1 Pseudogene 3 2 3 5
  • POU Domain Class 5, Transcription Factor 1 Pseudogene 3 2 3
  • POU Domain Transcription Factor OCT4-Pg3 3 13
  • POU Domain, Class 5, Transcription Factor 1-Like 2
  • POU Domain, Class 5, Transcription Factor 1 3
  • Octamer-Binding Transcription Factor 3 3
  • Octamer-Binding Protein 3 3
  • Octamer-Binding Protein 4 3
  • POU5FLC12 3
  • OCT4-Pg3 3
  • POU5F1L 3
  • POU5F1 3
  • OTF-3 3
  • Oct-3 3
  • Oct-4 3
  • OTF3L 3
  • OCT3 3
  • OCT4 3
  • OTF3 3

External Ids for POU5F1P3 Gene

Previous HGNC Symbols for POU5F1P3 Gene

  • OTF3L
  • POU5F1L

Previous GeneCards Identifiers for POU5F1P3 Gene

  • GC12U900755
  • GC12M008179
  • GC12M008286

Summaries for POU5F1P3 Gene

GeneCards Summary for POU5F1P3 Gene

POU5F1P3 (POU Class 5 Homeobox 1 Pseudogene 3) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for POU5F1P3 Gene

Genomics for POU5F1P3 Gene

GeneHancer (GH) Regulatory Elements for POU5F1P3 Gene

Promoters and enhancers for POU5F1P3 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around POU5F1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for POU5F1P3 Gene

Genomic Locations for POU5F1P3 Gene
chr12:8,133,769-8,134,852
(GRCh38/hg38)
Size:
1,084 bases
Orientation:
Minus strand
chr12:8,286,365-8,287,448
(GRCh37/hg19)
Size:
1,084 bases
Orientation:
Minus strand

Genomic View for POU5F1P3 Gene

Genes around POU5F1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
POU5F1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for POU5F1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for POU5F1P3 Gene

Proteins for POU5F1P3 Gene

  • Protein details for POU5F1P3 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    D5K9X0-D5K9X0_HUMAN
    Recommended name:
    POU domain transcription factor OCT4-pg3
    Protein Accession:
    D5K9X0

    Protein attributes for POU5F1P3 Gene

    Size:
    186 amino acids
    Molecular mass:
    19190 Da
    Quaternary structure:
    No Data Available

neXtProt entry for POU5F1P3 Gene

Post-translational modifications for POU5F1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for POU5F1P3 Gene

Domains & Families for POU5F1P3 Gene

Gene Families for POU5F1P3 Gene

Protein Domains for POU5F1P3 Gene

Suggested Antigen Peptide Sequences for POU5F1P3 Gene

GenScript: Design optimal peptide antigens:
  • POU domain transcription factor OCT4-pg3 (D5K9S6_HUMAN)
  • POU domain transcription factor OCT4-pg3 (D5K9S7_HUMAN)
  • POU domain transcription factor OCT4-pg3 (D5K9T2_HUMAN)
  • POU domain transcription factor OCT4-pg3 (D5K9T4_HUMAN)
  • POU domain transcription factor OCT4-pg3 (D5K9T5_HUMAN)
genes like me logo Genes that share domains with POU5F1P3: view

No data available for Graphical View of Domain Structure and UniProtKB/Swiss-Prot for POU5F1P3 Gene

Function for POU5F1P3 Gene

Phenotypes From GWAS Catalog for POU5F1P3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for POU5F1P3 Gene

Localization for POU5F1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for POU5F1P3 Gene

Pathways & Interactions for POU5F1P3 Gene

PathCards logo

SuperPathways for POU5F1P3 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for POU5F1P3 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for POU5F1P3 Gene

Drugs & Compounds for POU5F1P3 Gene

No Compound Related Data Available

Transcripts for POU5F1P3 Gene

mRNA/cDNA for POU5F1P3 Gene

60 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for POU5F1P3 Gene

No ASD Table

Relevant External Links for POU5F1P3 Gene

GeneLoc Exon Structure for
POU5F1P3

Expression for POU5F1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for POU5F1P3 Gene

mRNA differential expression in normal tissues according to GTEx for POU5F1P3 Gene

This gene is overexpressed in Whole Blood (x6.9).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for POU5F1P3

SOURCE GeneReport for Unigene cluster for POU5F1P3 Gene:

Hs.646545
genes like me logo Genes that share expression patterns with POU5F1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for POU5F1P3 Gene

Orthologs for POU5F1P3 Gene

Evolution for POU5F1P3 Gene

ENSEMBL:
Gene Tree for POU5F1P3 (if available)
TreeFam:
Gene Tree for POU5F1P3 (if available)

No data available for Orthologs for POU5F1P3 Gene

Paralogs for POU5F1P3 Gene

(4) SIMAP similar genes for POU5F1P3 Gene using alignment to 11 proteins:

  • D5K9S6_HUMAN
  • D5K9S7_HUMAN
  • D5K9T2_HUMAN
  • D5K9T4_HUMAN
  • D5K9T5_HUMAN
  • D5K9W4_HUMAN
  • D5K9X0_HUMAN
  • D5K9X6_HUMAN
  • D5K9Y0_HUMAN
  • E9LR97_HUMAN
  • E9LR98_HUMAN
genes like me logo Genes that share paralogs with POU5F1P3: view

No data available for Paralogs for POU5F1P3 Gene

Variants for POU5F1P3 Gene

Structural Variations from Database of Genomic Variants (DGV) for POU5F1P3 Gene

Variant ID Type Subtype PubMed ID
esv2759877 CNV gain+loss 17122850
nsv428270 CNV gain 18775914
nsv976563 CNV duplication 23825009

Additional Variant Information for POU5F1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
POU5F1P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) and Variation tolerance for POU5F1P3 Gene

Disorders for POU5F1P3 Gene

Additional Disease Information for POU5F1P3

No disorders were found for POU5F1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for POU5F1P3 Gene

Publications for POU5F1P3 Gene

  1. In situ hybridization localizes the human OTF3 to chromosome 6p21.3-->p22 and OTF3L to 12p13. (PMID: 8500351) Guillaudeux T … Pontarotti P (Cytogenetics and cell genetics 1993) 2 3 54
  2. Expression and differentiation between OCT4A and its Pseudogenes in human ESCs and differentiated adult somatic cells. (PMID: 24586860) Jez M … Dominko T (PloS one 2014) 3 54
  3. Differential expression of Oct4 variants and pseudogenes in normal urothelium and urothelial cancer. (PMID: 23933063) Wezel F … Southgate J (The American journal of pathology 2013) 3 54
  4. Oct4 and its pseudogenes confuse stem cell research. (PMID: 18371374) Liedtke S … Kögler G (Cell stem cell 2007) 3 54
  5. Oct-3/4: not just a gatekeeper of pluripotency for embryonic stem cell, a cell fate instructor through a gene dosage effect. (PMID: 17245123) Stefanovic S … Pucéat M (Cell cycle (Georgetown, Tex.) 2007) 3 54

Products for POU5F1P3 Gene

Sources for POU5F1P3 Gene