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Aliases for POU5F1P3 Gene

Aliases for POU5F1P3 Gene

  • POU Class 5 Homeobox 1 Pseudogene 3 2 3 5
  • POU Domain Class 5, Transcription Factor 1 Pseudogene 3 2 3
  • POU Domain, Class 5, Transcription Factor 1-Like 2
  • POU Domain Transcription Factor OCT4-Pg3 3
  • POU5FLC12 3
  • OCT4-Pg3 3
  • POU5F1L 3
  • OTF3L 3

External Ids for POU5F1P3 Gene

Previous HGNC Symbols for POU5F1P3 Gene

  • OTF3L
  • POU5F1L

Previous GeneCards Identifiers for POU5F1P3 Gene

  • GC12U900755
  • GC12M008179
  • GC12M008286

Summaries for POU5F1P3 Gene

GeneCards Summary for POU5F1P3 Gene

POU5F1P3 (POU Class 5 Homeobox 1 Pseudogene 3) is a Pseudogene.

Additional gene information for POU5F1P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for POU5F1P3 Gene

Genomics for POU5F1P3 Gene

GeneHancer (GH) Regulatory Elements for POU5F1P3 Gene

Promoters and enhancers for POU5F1P3 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I008079 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 20.2 +53.2 53220 3.7 HDGF PKNOX1 SMAD1 ARID4B SIN3A FEZF1 DMAP1 YBX1 ZNF2 YY1 NECAP1 ENSG00000284697 ENSG00000279865 FOXJ2 ENSG00000256967 M6PR POU5F1P3 LINC00612 C1RL-AS1 HADHAP2
GH12I008031 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.2 +100.8 100812 4.6 ARID4B SIN3A ZNF48 YY1 ETS1 TCF12 ZNF121 GLIS2 GATA2 KLF13 FOXJ2 C3AR1 POU5F1P3 M6PR ENSG00000256967 NECAP1
GH12I007933 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.1 +199.7 199747 4.8 PKNOX1 ATF1 SMAD1 ARID4B SIN3A ZNF2 IRF4 YY1 NCOA2 ETS1 SLC2A3 SLC2A14 POU5F1P3 ENSG00000256967 GC12M007881
GH12I008025 Enhancer 1.5 Ensembl ENCODE dbSUPER 11.2 +108.1 108056 2.9 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A POU5F1P3 M6PR ENSG00000256967 HSPD1P12 GC12M007989 FOXJ2
GH12I007903 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.6 +229.0 229016 5 FOXA2 MLX ZFP64 ARID4B ZNF2 ZNF121 FOS ATF7 SP5 NCOA1 SLC2A14 SCARNA12 ENSG00000256967 FOXJ2 C1RL-AS1 POU5F1P3 DPPA3 GC12P007899 GC12M007881
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around POU5F1P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for POU5F1P3 Gene

Genomic Locations for POU5F1P3 Gene
1,084 bases
Minus strand

Genomic View for POU5F1P3 Gene

Genes around POU5F1P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
POU5F1P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for POU5F1P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for POU5F1P3 Gene

Proteins for POU5F1P3 Gene

  • Protein details for POU5F1P3 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Recommended name:
    POU domain transcription factor OCT4-pg3
    Protein Accession:

    Protein attributes for POU5F1P3 Gene

    186 amino acids
    Molecular mass:
    19192 Da
    Quaternary structure:
    No Data Available

neXtProt entry for POU5F1P3 Gene

Post-translational modifications for POU5F1P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for POU5F1P3 Gene

Domains & Families for POU5F1P3 Gene

Gene Families for POU5F1P3 Gene

Protein Domains for POU5F1P3 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with POU5F1P3: view

No data available for UniProtKB/Swiss-Prot for POU5F1P3 Gene

Function for POU5F1P3 Gene

Phenotypes From GWAS Catalog for POU5F1P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for POU5F1P3 Gene

Localization for POU5F1P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for POU5F1P3 Gene

Pathways & Interactions for POU5F1P3 Gene

SuperPathways for POU5F1P3 Gene

No Data Available

Interacting Proteins for POU5F1P3 Gene

Gene Ontology (GO) - Biological Process for POU5F1P3 Gene


No data available for Pathways by source and SIGNOR curated interactions for POU5F1P3 Gene

Drugs & Compounds for POU5F1P3 Gene

No Compound Related Data Available

Transcripts for POU5F1P3 Gene

mRNA/cDNA for POU5F1P3 Gene

(22) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for POU5F1P3 Gene

POU class 5 homeobox 1 pseudogene 3:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for POU5F1P3 Gene

No ASD Table

Relevant External Links for POU5F1P3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for POU5F1P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for POU5F1P3 Gene

mRNA differential expression in normal tissues according to GTEx for POU5F1P3 Gene

This gene is overexpressed in Whole Blood (x6.9).

NURSA nuclear receptor signaling pathways regulating expression of POU5F1P3 Gene:


SOURCE GeneReport for Unigene cluster for POU5F1P3 Gene:

genes like me logo Genes that share expression patterns with POU5F1P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for POU5F1P3 Gene

Orthologs for POU5F1P3 Gene

Evolution for POU5F1P3 Gene

Gene Tree for POU5F1P3 (if available)
Gene Tree for POU5F1P3 (if available)

No data available for Orthologs for POU5F1P3 Gene

Paralogs for POU5F1P3 Gene

genes like me logo Genes that share paralogs with POU5F1P3: view

No data available for Paralogs for POU5F1P3 Gene

Variants for POU5F1P3 Gene

Sequence variations from dbSNP and Humsavar for POU5F1P3 Gene

SNP ID Clin Chr 12 pos Variation AA Info Type
rs1000559858 -- 8,136,487(-) C/T upstream_transcript_variant
rs1000615281 -- 8,136,797(-) T/C upstream_transcript_variant
rs1002617467 -- 8,133,638(-) C/G downstream_transcript_variant
rs1003377921 -- 8,136,037(-) T/A upstream_transcript_variant
rs1008409597 -- 8,135,497(-) C/T upstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for POU5F1P3 Gene

Variant ID Type Subtype PubMed ID
esv2759877 CNV gain+loss 17122850
nsv428270 CNV gain 18775914
nsv976563 CNV duplication 23825009

Additional Variant Information for POU5F1P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for POU5F1P3 Gene

Disorders for POU5F1P3 Gene

Additional Disease Information for POU5F1P3

No disorders were found for POU5F1P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for POU5F1P3 Gene

Publications for POU5F1P3 Gene

  1. In situ hybridization localizes the human OTF3 to chromosome 6p21.3-->p22 and OTF3L to 12p13. (PMID: 8500351) Guillaudeux T … Pontarotti P (Cytogenetics and cell genetics 1993) 2 3 58
  2. Expression and differentiation between OCT4A and its Pseudogenes in human ESCs and differentiated adult somatic cells. (PMID: 24586860) Jez M … Dominko T (PloS one 2014) 3 58
  3. Differential expression of Oct4 variants and pseudogenes in normal urothelium and urothelial cancer. (PMID: 23933063) Wezel F … Southgate J (The American journal of pathology 2013) 3 58
  4. Oct-3/4: not just a gatekeeper of pluripotency for embryonic stem cell, a cell fate instructor through a gene dosage effect. (PMID: 17245123) Stefanovic S … Pucéat M (Cell cycle (Georgetown, Tex.) 2007) 3 58
  5. Oct4 and its pseudogenes confuse stem cell research. (PMID: 18371374) Liedtke S … Kögler G (Cell stem cell 2007) 3 58

Products for POU5F1P3 Gene

Sources for POU5F1P3 Gene

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