Aliases for POLRMTP1 Gene

Aliases for POLRMTP1 Gene

  • RNA Polymerase Mitochondrial Pseudogene 1 2 3 5
  • Polymerase (RNA) Mitochondrial (DNA Directed) Pseudogene 1 2 3
  • Polymerase (RNA) Mitochondrial Pseudogene 1 2 3
  • Polymerase (RNA) Mitochondrial (DNA Directed)-Like 2
  • POLRMTP1 5
  • POLRMTL 3

External Ids for POLRMTP1 Gene

Previous HGNC Symbols for POLRMTP1 Gene

  • POLRMTL

Previous GeneCards Identifiers for POLRMTP1 Gene

  • GC17M060215

Summaries for POLRMTP1 Gene

GeneCards Summary for POLRMTP1 Gene

POLRMTP1 (RNA Polymerase Mitochondrial Pseudogene 1) is a Pseudogene.

Additional gene information for POLRMTP1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for POLRMTP1 Gene

Genomics for POLRMTP1 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for POLRMTP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J062140 Enhancer 0.7 Ensembl ENCODE 250.7 -0.4 -405 0.7 ESRRA ZBTB33 ZNF592 BCOR ZKSCAN1 RCOR1 CBFA2T3 POLRMTP1 piR-42491-098 MED13 EFCAB3
GH17J062142 Enhancer 1.1 Ensembl ENCODE 0.7 -2.9 -2914 1.7 NCOR1 IKZF1 ZNF592 NFIC ZNF217 NONO REST HES1 BHLHE40 MBD2 MED13 RPS10P26 ENSG00000266934 MRC2 LOC101927855 LINC02875 POLRMTP1 piR-42491-098 EFCAB3
GH17J062163 Enhancer 1.1 Ensembl ENCODE 0.4 -24.3 -24349 3.2 IKZF1 ZNF592 CEBPA NFIC YY1 ZNF217 SIX4 ZBTB7B HES1 MBD2 EFCAB3 ENSG00000239809 RNU7-52P RPS23P7 piR-42491-098 POLRMTP1 MED13
GH17J062135 Enhancer 0.3 Ensembl 0.7 +4.7 4738 0.2 NFXL1 POLRMTP1 HSALNG0117935 MED13 EFCAB3
GH17J062159 Enhancer 0.5 Ensembl 0.4 -19.3 -19262 0.2 SP1 NCOA3 YBX1 ZNF366 ZNF512 ATF7 ZKSCAN1 piR-42491-098 POLRMTP1 MED13 EFCAB3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around POLRMTP1 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for POLRMTP1 Gene

Latest Assembly
chr17:62,136,923-62,140,639
(GRCh38/hg38)
Size:
3,717 bases
Orientation:
Minus strand

Previous Assembly
chr17:60,214,284-60,218,000
(GRCh37/hg19 by Entrez Gene)
Size:
3,717 bases
Orientation:
Minus strand

chr17:60,214,333-60,218,000
(GRCh37/hg19 by Ensembl)
Size:
3,668 bases
Orientation:
Minus strand

Genomic View for POLRMTP1 Gene

Genes around POLRMTP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
POLRMTP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for POLRMTP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for POLRMTP1 Gene

Proteins for POLRMTP1 Gene

Post-translational modifications for POLRMTP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for POLRMTP1 Gene

Domains & Families for POLRMTP1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for POLRMTP1 Gene

Function for POLRMTP1 Gene

Phenotypes From GWAS Catalog for POLRMTP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for POLRMTP1 Gene

Localization for POLRMTP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for POLRMTP1 Gene

Pathways & Interactions for POLRMTP1 Gene

PathCards logo

SuperPathways for POLRMTP1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for POLRMTP1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for POLRMTP1 Gene

Drugs & Compounds for POLRMTP1 Gene

No Compound Related Data Available

Transcripts for POLRMTP1 Gene

mRNA/cDNA for POLRMTP1 Gene

1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for POLRMTP1 Gene

No ASD Table

Relevant External Links for POLRMTP1 Gene

GeneLoc Exon Structure for
POLRMTP1

Expression for POLRMTP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for POLRMTP1 Gene

mRNA differential expression in normal tissues according to GTEx for POLRMTP1 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x5.5) and Testis (x5.0).

Transcriptomic regulation report from SPP (The Signaling Pathways Project) for POLRMTP1

SOURCE GeneReport for Unigene cluster for POLRMTP1 Gene:

Hs.512026
genes like me logo Genes that share expression patterns with POLRMTP1: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for POLRMTP1 Gene

Orthologs for POLRMTP1 Gene

Evolution for POLRMTP1 Gene

ENSEMBL:
Gene Tree for POLRMTP1 (if available)
TreeFam:
Gene Tree for POLRMTP1 (if available)
Alliance of Genome Resources:
Additional Orthologs for POLRMTP1

No data available for Orthologs for POLRMTP1 Gene

Paralogs for POLRMTP1 Gene

No data available for Paralogs for POLRMTP1 Gene

Variants for POLRMTP1 Gene

Additional Variant Information for POLRMTP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
POLRMTP1
Leiden Open Variation Database (LOVD)
POLRMTP1

SNP Genotyping and Copy Number Assays for research

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for POLRMTP1 Gene

Disorders for POLRMTP1 Gene

Additional Disease Information for POLRMTP1

No disorders were found for POLRMTP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for POLRMTP1 Gene

Publications for POLRMTP1 Gene

No publications were found for POLRMTP1 Gene.

Products for POLRMTP1 Gene

Sources for POLRMTP1 Gene