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PNN (Pinin, Desmosome Associated Protein) is a Protein Coding gene. Diseases associated with PNN include Volkmann Contracture and Melanoma. Among its related pathways are mRNA surveillance pathway and RNA transport. Gene Ontology (GO) annotations related to this gene include structural molecule activity.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0003677 | DNA binding | IEA | -- |
GO:0003723 | RNA binding | HDA | 22658674 |
GO:0005198 | structural molecule activity | NAS | 8922384 |
GO:0005515 | protein binding | IPI | 18794151 |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005634 | nucleus | IEA | -- |
GO:0005681 | spliceosomal complex | IEA | -- |
GO:0005882 | intermediate filament | TAS | 10809736 |
GO:0005886 | plasma membrane | TAS | 8922384 |
GO:0005911 | cell-cell junction | TAS,IBA | 21873635 |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | mRNA surveillance pathway | ||
2 | RNA transport |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0000398 | mRNA splicing, via spliceosome | IC | 11991638 |
GO:0006397 | mRNA processing | IEA | -- |
GO:0007155 | cell adhesion | TAS,IBA | 21873635 |
GO:0008380 | RNA splicing | IEA | -- |
ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | ^ | 6 | ^ | 7a | · | 7b | ^ | 8a | · | 8b | · | 8c | ^ | 9 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | ||||||||||||||||||||||||||||||
SP2: | - | ||||||||||||||||||||||||||||||
SP3: | - | ||||||||||||||||||||||||||||||
SP4: | - | - | |||||||||||||||||||||||||||||
SP5: | - | - | |||||||||||||||||||||||||||||
SP6: | |||||||||||||||||||||||||||||||
SP7: |
This gene was present in the common ancestor of animals.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | PNN 30 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | PNN 30 31 |
|
OneToOne | |
Mouse (Mus musculus) |
Mammalia | Pnn 30 17 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Pnn 30 |
|
||
Dog (Canis familiaris) |
Mammalia | PNN 31 |
|
OneToOne | |
Oppossum (Monodelphis domestica) |
Mammalia | PNN 31 |
|
OneToOne | |
Platypus (Ornithorhynchus anatinus) |
Mammalia | PNN 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | PNN 30 31 |
|
OneToOne | |
Lizard (Anolis carolinensis) |
Reptilia | PNN 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | Str.7384 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | pnn 31 |
|
OneToOne | |
wufb24d03 30 |
|
||||
Fruit Fly (Drosophila melanogaster) |
Insecta | Pnn 31 |
|
OneToOne |
SNP ID | Clinical significance and condition | Chr 14 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
768649 | Benign: not provided | 39,181,581(+) | C/T | SYNONYMOUS_VARIANT | |
779157 | Benign: not provided | 39,176,159(+) | C/T | INTRON_VARIANT | |
784530 | Benign: not provided | 39,181,285(+) | G/A | MISSENSE_VARIANT | |
788117 | Benign: not provided | 39,179,145(+) | A/C | SYNONYMOUS_VARIANT | |
rs13021 | - | p.Ser671Gly |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
nsv1051247 | CNV | gain | 25217958 |
Disorder | Aliases | PubMed IDs |
---|---|---|
volkmann contracture |
|
|
melanoma |
|
|