Free for academic non-profit institutions. Other users need a Commercial license

Aliases for PNMA8C Gene

Aliases for PNMA8C Gene

  • PNMA Family Member 8C 2 3 5
  • Paraneoplastic Ma Antigen Family Member 8C 2 3
  • Paraneoplastic Antigen-Like Protein 8C 4

External Ids for PNMA8C Gene

Summaries for PNMA8C Gene

GeneCards Summary for PNMA8C Gene

PNMA8C (PNMA Family Member 8C) is a Protein Coding gene. An important paralog of this gene is PNMA6A.

Additional gene information for PNMA8C Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PNMA8C Gene

Genomics for PNMA8C Gene

GeneHancer (GH) Regulatory Elements for PNMA8C Gene

Promoters and enhancers for PNMA8C Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046428 Promoter/Enhancer 1.2 Ensembl ENCODE 600.7 +0.2 150 1.2 CSDE1 CREM CREB1 RFX1 ATF1 POLR2A ATF7 CTBP1 BMI1 RCOR1 PNMA8C PNMA8A CCDC8
GH19J046425 Promoter/Enhancer 1.4 Ensembl ENCODE dbSUPER 0.7 +2.1 2123 2.3 CSDE1 RFX1 POLR2A HDAC1 NRF1 RFX3 ZXDB EGR1 ZBTB2 RUNX3 PNMA8A CCDC8 PNMA8C
GH19J046415 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 0.4 +12.5 12531 2.2 SP1 ZNF148 MLLT1 ZNF121 CSDE1 ZSCAN21 SP7 KLF14 SP5 EGR1 PPP5C IRF2BP1 ENSG00000269124 HIF3A CCDC8 PNMA8C
GH19J046431 Enhancer 0.6 dbSUPER 0.7 -2.8 -2794 0.6 CC2D1A CTCF ARID2 REST BCOR ZNF768 ADNP ZMYM3 RAD21 KDM1A PNMA8A PNMA8C PIR47325 GC19P046447
GH19J046442 Enhancer 0.8 ENCODE dbSUPER 0.4 -14.0 -13992 1.3 MAFK SP7 PHF21A NFE2 FOS NFIC FOSL2 ZNF335 JUND KDM1A PNMA8A HIF3A CCDC8 GC19P046447 PIR47325 PNMA8C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PNMA8C on UCSC Golden Path with GeneCards custom track

Genomic Locations for PNMA8C Gene

Genomic Locations for PNMA8C Gene
chr19:46,424,697-46,428,951
(GRCh38/hg38)
Size:
4,255 bases
Orientation:
Minus strand

Genomic View for PNMA8C Gene

Genes around PNMA8C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PNMA8C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PNMA8C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for PNMA8C Gene

Proteins for PNMA8C Gene

  • Protein details for PNMA8C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A1B0GUJ8-PNM8C_HUMAN
    Recommended name:
    Paraneoplastic antigen-like protein 8C
    Protein Accession:
    A0A1B0GUJ8

    Protein attributes for PNMA8C Gene

    Size:
    204 amino acids
    Molecular mass:
    22873 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PNMA8C Gene

Post-translational modifications for PNMA8C Gene

No Post-translational modifications

Other Protein References for PNMA8C Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for PNMA8C Gene

Domains & Families for PNMA8C Gene

Gene Families for PNMA8C Gene

Protein Domains for PNMA8C Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A0A1B0GUJ8

UniProtKB/Swiss-Prot:

PNM8C_HUMAN :
  • Belongs to the PNMA family.
Family:
  • Belongs to the PNMA family.
genes like me logo Genes that share domains with PNMA8C: view

No data available for Suggested Antigen Peptide Sequences for PNMA8C Gene

Function for PNMA8C Gene

Phenotypes From GWAS Catalog for PNMA8C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PNMA8C Gene

Localization for PNMA8C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PNMA8C Gene

Pathways & Interactions for PNMA8C Gene

PathCards logo

SuperPathways for PNMA8C Gene

No Data Available

Interacting Proteins for PNMA8C Gene

Gene Ontology (GO) - Biological Process for PNMA8C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PNMA8C Gene

Drugs & Compounds for PNMA8C Gene

No Compound Related Data Available

Transcripts for PNMA8C Gene

mRNA/cDNA for PNMA8C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PNMA8C Gene

No ASD Table

Relevant External Links for PNMA8C Gene

GeneLoc Exon Structure for
PNMA8C
ECgene alternative splicing isoforms for
PNMA8C

Expression for PNMA8C Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PNMA8C Gene

Orthologs for PNMA8C Gene

Evolution for PNMA8C Gene

ENSEMBL:
Gene Tree for PNMA8C (if available)
TreeFam:
Gene Tree for PNMA8C (if available)

No data available for Orthologs for PNMA8C Gene

Paralogs for PNMA8C Gene

genes like me logo Genes that share paralogs with PNMA8C: view

Variants for PNMA8C Gene

Additional Variant Information for PNMA8C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PNMA8C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PNMA8C Gene

Disorders for PNMA8C Gene

No disorders were found for PNMA8C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PNMA8C Gene

Publications for PNMA8C Gene

  1. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J … Lucas SM (Nature 2004) 4 58

Products for PNMA8C Gene

Sources for PNMA8C Gene

Content
Loading form....