Aliases for PNMA8C Gene

Aliases for PNMA8C Gene

  • PNMA Family Member 8C 2 3 5
  • Paraneoplastic Ma Antigen Family Member 8C 2 3
  • Paraneoplastic Antigen-Like Protein 8C 4
  • PNMA8C 5

External Ids for PNMA8C Gene

Summaries for PNMA8C Gene

GeneCards Summary for PNMA8C Gene

PNMA8C (PNMA Family Member 8C) is a Protein Coding gene. An important paralog of this gene is PNMA8A.

Additional gene information for PNMA8C Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PNMA8C Gene

Genomics for PNMA8C Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for PNMA8C Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J046425 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +1.4 1423 3.7 CREB1 ATF7 RFX1 RFX5 JUND POLR2A EZH2 HDAC1 YY1 NRF1 PNMA8C PNMA8A CCDC8 lnc-PNMA8C-5
GH19J046415 Promoter/Enhancer 1.6 ENCODE CraniofacialAtlas dbSUPER 0.4 +12.5 12531 2.2 PRDM10 ZNF629 RFX1 LEF1 IKZF1 JUND MTA2 ZIC2 POLR2A PATZ1 PPP5C IRF2BP1 ENSG00000269124 HIF3A CCDC8 lnc-PNMA8C-5 PNMA8C
GH19J046470 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 -42.4 -42425 2.5 RFX1 RFX5 POLR2A MTA1 HDAC1 EP300 NRF1 MGA RAD21 NKRF PNMA8A piR-59450 piR-35418 PNMA8C
GH19J046431 Enhancer 0.6 dbSUPER 0.7 -2.8 -2794 0.6 CTCF KDM1A REST BCOR RAD21 ZNF384 ZNF768 ADNP ZMYM3 ZFP36 PNMA8A PNMA8C piR-53326
GH19J046442 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -14.0 -13954 1.4 PHF21A JUND NFE2 NR3C1 FOS NFIC FOSL2 ZNF335 KDM1A BCL6B PNMA8A HIF3A CCDC8 piR-53326 PNMA8C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PNMA8C on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for PNMA8C Gene

Genomic Locations for PNMA8C Gene
chr19:46,424,697-46,428,951
(GRCh38/hg38)
Size:
4,255 bases
Orientation:
Minus strand

Genomic View for PNMA8C Gene

Genes around PNMA8C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PNMA8C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PNMA8C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for PNMA8C Gene

Proteins for PNMA8C Gene

  • Protein details for PNMA8C Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A0A1B0GUJ8-PNM8C_HUMAN
    Recommended name:
    Paraneoplastic antigen-like protein 8C
    Protein Accession:
    A0A1B0GUJ8

    Protein attributes for PNMA8C Gene

    Size:
    204 amino acids
    Molecular mass:
    22873 Da
    Quaternary structure:
    No Data Available

neXtProt entry for PNMA8C Gene

Post-translational modifications for PNMA8C Gene

No Post-translational modifications

Other Protein References for PNMA8C Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for PNMA8C Gene

Domains & Families for PNMA8C Gene

Gene Families for PNMA8C Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for PNMA8C Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

A0A1B0GUJ8

UniProtKB/Swiss-Prot:

PNM8C_HUMAN :
  • Belongs to the PNMA family.
Family:
  • Belongs to the PNMA family.
genes like me logo Genes that share domains with PNMA8C: view

No data available for Suggested Antigen Peptide Sequences for PNMA8C Gene

Function for PNMA8C Gene

Phenotypes From GWAS Catalog for PNMA8C Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PNMA8C Gene

Localization for PNMA8C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PNMA8C Gene

Pathways & Interactions for PNMA8C Gene

PathCards logo

SuperPathways for PNMA8C Gene

No Data Available

Interacting Proteins for PNMA8C Gene

Gene Ontology (GO) - Biological Process for PNMA8C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PNMA8C Gene

Drugs & Compounds for PNMA8C Gene

No Compound Related Data Available

Transcripts for PNMA8C Gene

mRNA/cDNA for PNMA8C Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for PNMA8C Gene

No ASD Table

Relevant External Links for PNMA8C Gene

GeneLoc Exon Structure for
PNMA8C

Expression for PNMA8C Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PNMA8C Gene

Orthologs for PNMA8C Gene

Evolution for PNMA8C Gene

ENSEMBL:
Gene Tree for PNMA8C (if available)
TreeFam:
Gene Tree for PNMA8C (if available)

No data available for Orthologs for PNMA8C Gene

Paralogs for PNMA8C Gene

genes like me logo Genes that share paralogs with PNMA8C: view

Variants for PNMA8C Gene

Additional Variant Information for PNMA8C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PNMA8C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PNMA8C Gene

Disorders for PNMA8C Gene

Additional Disease Information for PNMA8C

No disorders were found for PNMA8C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PNMA8C Gene

Publications for PNMA8C Gene

  1. The DNA sequence and biology of human chromosome 19. (PMID: 15057824) Grimwood J … Lucas SM (Nature 2004) 4

Products for PNMA8C Gene

Sources for PNMA8C Gene