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The protein encoded by this gene catalyzes the isomerization of mannose 6-phosphate to mannose 1-phosphate, which is a precursor to GDP-mannose necessary for the synthesis of dolichol-P-oligosaccharides. Mutations in this gene have been shown to cause defects in glycoprotein biosynthesis, which manifests as carbohydrate-deficient glycoprotein syndrome type I. [provided by RefSeq, Jul 2008]
PMM2 (Phosphomannomutase 2) is a Protein Coding gene. Diseases associated with PMM2 include Congenital Disorder Of Glycosylation, Type Ia and Cerebral Atrophy. Among its related pathways are Metabolism of proteins and Transport to the Golgi and subsequent modification. Gene Ontology (GO) annotations related to this gene include phosphomannomutase activity. An important paralog of this gene is PMM1.
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0004615 | phosphomannomutase activity | IEA,IBA | 21873635 |
GO:0005515 | protein binding | IPI | 25416956 |
GO:0016853 | isomerase activity | IEA | -- |
GO:0046872 | metal ion binding | IEA | -- |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0005654 | nucleoplasm | IDA | -- |
GO:0005737 | cytoplasm | IEA | -- |
GO:0005829 | cytosol | TAS | -- |
GO:0043025 | neuronal cell body | IEA | -- |
SuperPathway | Contained pathways | ||
---|---|---|---|
1 | Fructose and mannose metabolism | ||
2 | Synthesis of substrates in N-glycan biosythesis | ||
3 | Metabolism of proteins | ||
4 | Amino sugar and nucleotide sugar metabolism | ||
5 | Biosynthesis of cofactors |
GO ID | Qualified GO term | Evidence | PubMed IDs |
---|---|---|---|
GO:0006013 | mannose metabolic process | IBA | 21873635 |
GO:0006486 | protein glycosylation | TAS | 9140401 |
GO:0006487 | protein N-linked glycosylation | IBA | 21873635 |
GO:0009298 | GDP-mannose biosynthetic process | IEA,TAS | -- |
GO:0045047 | protein targeting to ER | IBA | -- |
Name | Synonyms | Role | CAS Number | PubChem IDs | PubMed IDs |
---|
ExUns: | 1a | · | 1b | · | 1c | · | 1d | · | 1e | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5a | · | 5b | · | 5c | ^ | 6a | · | 6b | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | · | 10c | · | 10d |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
SP1: | - | - | - | - | - | ||||||||||||||||||||||||||||||||||
SP2: | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||
SP3: | - | - | - | - | - | - | |||||||||||||||||||||||||||||||||
SP4: | - | - | - | - | - | - | - | ||||||||||||||||||||||||||||||||
SP5: | - | - | - | - | - | - | - | - | |||||||||||||||||||||||||||||||
SP6: | - | ||||||||||||||||||||||||||||||||||||||
SP7: | - | ||||||||||||||||||||||||||||||||||||||
SP8: | |||||||||||||||||||||||||||||||||||||||
SP9: | - | - | |||||||||||||||||||||||||||||||||||||
SP10: |
This gene was present in the common ancestor of eukaryotes.
Organism | Taxonomy | Gene | Similarity | Type | Details |
---|---|---|---|---|---|
Chimpanzee (Pan troglodytes) |
Mammalia | PMM2 30 31 |
|
OneToOne | |
Dog (Canis familiaris) |
Mammalia | PMM2 30 31 |
|
OneToOne | |
Rat (Rattus norvegicus) |
Mammalia | Pmm2 30 |
|
||
Mouse (Mus musculus) |
Mammalia | Pmm2 30 17 31 |
|
OneToOne | |
Cow (Bos Taurus) |
Mammalia | PMM2 30 31 |
|
OneToOne | |
Oppossum (Monodelphis domestica) |
Mammalia | -- 31 |
|
OneToMany | |
-- 31 |
|
OneToMany | |||
Platypus (Ornithorhynchus anatinus) |
Mammalia | PMM2 31 |
|
OneToOne | |
Chicken (Gallus gallus) |
Aves | PMM2 30 31 |
|
OneToOne | |
Lizard (Anolis carolinensis) |
Reptilia | PMM2 31 |
|
OneToOne | |
Tropical Clawed Frog (Silurana tropicalis) |
Amphibia | pmm1 30 |
|
||
African clawed frog (Xenopus laevis) |
Amphibia | Xl.27399 30 |
|
||
Zebrafish (Danio rerio) |
Actinopterygii | pmm2 30 31 |
|
OneToOne | |
Rainbow Trout (Oncorhynchus mykiss) |
Actinopterygii | Omy.8332 30 |
|
||
African malaria mosquito (Anopheles gambiae) |
Insecta | AgaP_AGAP011353 30 |
|
||
Fruit Fly (Drosophila melanogaster) |
Insecta | CG10688 30 31 32 |
|
OneToMany | |
Worm (Caenorhabditis elegans) |
Secernentea | CELE_F52B11.2 30 |
|
||
F52B11.2 31 32 |
|
OneToMany | |||
Baker's yeast (Saccharomyces cerevisiae) |
Saccharomycetes | SEC53 30 31 33 |
|
OneToMany | |
K. Lactis Yeast (Kluyveromyces lactis) |
Saccharomycetes | KLLA0D05709g 30 |
|
||
A. gosspyii yeast (Eremothecium gossypii) |
Saccharomycetes | AGOS_ABR236W 30 |
|
||
Thale Cress (Arabidopsis thaliana) |
eudicotyledons | PMM 30 |
|
||
Alicante grape (Vitis vinifera) |
eudicotyledons | Vvi.6965 30 |
|
||
Soybean (Glycine max) |
eudicotyledons | Gma.3992 30 |
|
||
Rice (Oryza sativa) |
Liliopsida | Os04g0682300 30 |
|
||
Os.8518 30 |
|
||||
Barley (Hordeum vulgare) |
Liliopsida | Hv.3523 30 |
|
||
Wheat (Triticum aestivum) |
Liliopsida | Ta.29895 30 |
|
||
Corn (Zea mays) |
Liliopsida | Zm.7133 30 |
|
||
Sea Squirt (Ciona savignyi) |
Ascidiacea | -- 31 |
|
OneToMany | |
Fission Yeast (Schizosaccharomyces pombe) |
Schizosaccharomycetes | pmm1 30 |
|
||
Bread mold (Neurospora crassa) |
Ascomycetes | NCU02829 30 |
|
||
Sea Vase (Ciona intestinalis) |
Ascidiacea | Cin.3780 30 |
|
SNP ID | Clinical significance and condition | Chr 16 pos | Variation | AA Info | Type |
---|---|---|---|---|---|
694260 | Pathogenic/Likely Pathogenic: Congenital disorder of glycosylation, type Ia | 8,811,080(+) |
G/T NM_000303.3(PMM2):c.349G>T (p.Gly117Cys) |
MISSENSE | |
835199 | Uncertain Significance: Congenital disorder of glycosylation, type Ia | 8,797,941(+) |
C/G NM_000303.3(PMM2):c.59C>G (p.Pro20Arg) |
MISSENSE | |
837009 | Uncertain Significance: Congenital disorder of glycosylation, type Ia | 8,797,938(+) |
C/T NM_000303.3(PMM2):c.56C>T (p.Ala19Val) |
MISSENSE | |
841043 | Uncertain Significance: Congenital disorder of glycosylation, type Ia | 8,801,859(+) |
G/T NM_000303.3(PMM2):c.127G>T (p.Val43Leu) |
MISSENSE | |
850123 | Uncertain Significance: Congenital disorder of glycosylation, type Ia | 8,813,026(+) |
T/C NM_000303.3(PMM2):c.559T>C (p.Trp187Arg) |
MISSENSE |
Variant ID | Type | Subtype | PubMed ID |
---|---|---|---|
dgv341n27 | CNV | gain | 19166990 |
dgv4906n54 | CNV | gain | 21841781 |
esv1354772 | CNV | insertion | 17803354 |
esv24810 | CNV | loss | 19812545 |
esv27013 | CNV | gain | 19812545 |
esv2763129 | CNV | gain | 21179565 |
esv3307137 | CNV | mobile element insertion | 20981092 |
esv3420459 | CNV | insertion | 20981092 |
esv3432665 | CNV | insertion | 20981092 |
esv3570287 | CNV | gain | 25503493 |
esv3582005 | CNV | loss | 25503493 |
esv3637841 | CNV | gain | 21293372 |
esv3637845 | CNV | gain | 21293372 |
esv3637846 | CNV | gain | 21293372 |
esv3637849 | CNV | loss | 21293372 |
esv3637850 | CNV | gain | 21293372 |
nsv1036281 | CNV | gain | 25217958 |
nsv1036523 | CNV | gain | 25217958 |
nsv1043528 | CNV | gain | 25217958 |
nsv1047172 | CNV | gain | 25217958 |
nsv1134496 | CNV | deletion | 24896259 |
nsv457394 | CNV | gain | 19166990 |
nsv457398 | CNV | gain | 19166990 |
nsv521109 | CNV | loss | 19592680 |
nsv571424 | CNV | gain | 21841781 |
nsv571427 | CNV | gain | 21841781 |
nsv571428 | CNV | gain | 21841781 |
nsv833135 | CNV | loss | 17160897 |
Disorder | Aliases | PubMed IDs |
---|---|---|
congenital disorder of glycosylation, type ia |
|
|
cerebral atrophy |
|
|
cerebellar hypoplasia/atrophy, epilepsy, and global developmental delay |
|
|
cerebral palsy |
|
|
spasticity |
|
|