Aliases for PLCB2-AS1 Gene

Subcategory (RNA class) for PLCB2-AS1 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for PLCB2-AS1 Gene

  • PLCB2 Antisense RNA 1 2 3 5
  • PLCB2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • HSALNG0105216 167
  • NONHSAG016586 92
  • PLCB2-AS1 2

External Ids for PLCB2-AS1 Gene

Previous GeneCards Identifiers for PLCB2-AS1 Gene

  • GC15P040592

Summaries for PLCB2-AS1 Gene

GeneCards Summary for PLCB2-AS1 Gene

PLCB2-AS1 (PLCB2 Antisense RNA 1) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for PLCB2-AS1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PLCB2-AS1 Gene

Genomics for PLCB2-AS1 Gene

GeneHancer (GH) Regulatory Elements for PLCB2-AS1 Gene

Promoters and enhancers for PLCB2-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH15J040301 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 500.7 +1.4 1431 2.2 MYC CTBP1 NFIC MAX SPI1 BCOR E2F6 TAL1 ZBTB7A BHLHE40 PLCB2-AS1 PLCB2
GH15J040291 Promoter/Enhancer 1.1 Ensembl ENCODE 0.4 -9.3 -9285 1.2 HNRNPK NRF1 USF1 POLR2A GABPA ZBTB26 MYC CTBP1 KDM5B KLF9 lnc-PLCB2-1-001 lnc-PLCB2-1-003 KNSTRN ENSG00000244705 RNA5SP392 CCDC9B PHGR1 C15orf56 PAK6 DISP2
GH15J040296 Enhancer 0.5 Ensembl 0.7 -4.0 -3970 1 GATAD2B CTBP1 ZFHX2 DPF2 ZBTB7B ZFP36 GATA3 SMARCE1 ZNF316 PLCB2 RNA5SP392 CCDC9B PHGR1 DISP2 C15orf56 PAK6 KNSTRN PLCB2-AS1 lnc-PLCB2-1-003
GH15J040292 Enhancer 0.5 Ensembl 0.4 -6.7 -6669 1.6 EP300 RFX1 SMC3 MXI1 ZFHX2 EGR2 ZNF148 POLR2A RNA5SP392 CCDC9B PHGR1 DISP2 C15orf56 PAK6 lnc-PLCB2-1-003 PLCB2-AS1 PLCB2
GH15J040295 Enhancer 0.3 Ensembl 0.7 -4.9 -4869 0.4 ZIC2 RNA5SP392 CCDC9B PHGR1 DISP2 C15orf56 PAK6 PLCB2-AS1 lnc-PLCB2-1-003 PLCB2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PLCB2-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PLCB2-AS1 Gene

Genomic Locations for PLCB2-AS1 Gene
chr15:40,300,670-40,301,820
(GRCh38/hg38)
Size:
1,151 bases
Orientation:
Plus strand
chr15:40,592,871-40,594,021
(GRCh37/hg19)
Size:
1,151 bases
Orientation:
Plus strand

Genomic View for PLCB2-AS1 Gene

Genes around PLCB2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PLCB2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PLCB2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for PLCB2-AS1 Gene

Proteins for PLCB2-AS1 Gene

Post-translational modifications for PLCB2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PLCB2-AS1 Gene

Domains & Families for PLCB2-AS1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PLCB2-AS1 Gene

Function for PLCB2-AS1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PLCB2-AS1 Gene

Localization for PLCB2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PLCB2-AS1 Gene

Pathways & Interactions for PLCB2-AS1 Gene

PathCards logo

SuperPathways for PLCB2-AS1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PLCB2-AS1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PLCB2-AS1 Gene

Drugs & Compounds for PLCB2-AS1 Gene

No Compound Related Data Available

Transcripts for PLCB2-AS1 Gene

mRNA/cDNA for PLCB2-AS1 Gene

1 RNACentral transcripts :
1 NCBI additional mRNA sequence :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PLCB2-AS1 Gene

No ASD Table

Relevant External Links for PLCB2-AS1 Gene

GeneLoc Exon Structure for
PLCB2-AS1

Expression for PLCB2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PLCB2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for PLCB2-AS1 Gene

This gene is overexpressed in Whole Blood (x11.2) and Spleen (x6.0).
genes like me logo Genes that share expression patterns with PLCB2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PLCB2-AS1 Gene

Orthologs for PLCB2-AS1 Gene

Evolution for PLCB2-AS1 Gene

ENSEMBL:
Gene Tree for PLCB2-AS1 (if available)
TreeFam:
Gene Tree for PLCB2-AS1 (if available)

No data available for Orthologs for PLCB2-AS1 Gene

Paralogs for PLCB2-AS1 Gene

No data available for Paralogs for PLCB2-AS1 Gene

Variants for PLCB2-AS1 Gene

Additional Variant Information for PLCB2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PLCB2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PLCB2-AS1 Gene

Disorders for PLCB2-AS1 Gene

No disorders were found for PLCB2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PLCB2-AS1 Gene

Publications for PLCB2-AS1 Gene

No publications were found for PLCB2-AS1 Gene.

Products for PLCB2-AS1 Gene

Sources for PLCB2-AS1 Gene