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Aliases for PLA2G12AP1 Gene

Aliases for PLA2G12AP1 Gene

  • Phospholipase A2 Group XIIA Pseudogene 1 2 3 5
  • Phospholipase A2, Group XIIA Pseudogene 1 2

External Ids for PLA2G12AP1 Gene

Previous GeneCards Identifiers for PLA2G12AP1 Gene

  • GC01P052835

Summaries for PLA2G12AP1 Gene

GeneCards Summary for PLA2G12AP1 Gene

PLA2G12AP1 (Phospholipase A2 Group XIIA Pseudogene 1) is a Pseudogene.

Additional gene information for PLA2G12AP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for PLA2G12AP1 Gene

Genomics for PLA2G12AP1 Gene

GeneHancer (GH) Regulatory Elements for PLA2G12AP1 Gene

Promoters and enhancers for PLA2G12AP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I052368 Promoter/Enhancer 1.3 Ensembl ENCODE 550.8 +0.2 158 1.4 ARID4B MZF1 SIN3A ZNF76 DMAP1 RAD21 ZNF48 ZNF335 GLIS2 ZSCAN5C PLA2G12AP1 GC01P052369 CC2D1B ORC1 PODN ZCCHC11
GH01I052330 Enhancer 0.9 FANTOM5 11.5 -38.2 -38184 0.1 HDAC1 PKNOX1 ATF1 ARNT NFRKB ZBTB40 POLR2B E2F8 ATF7 CREM MAGOH PLA2G12AP1 CC2D1B TXNDC12 TXNDC12-AS1 KTI12 GC01M052353 GC01M052352 GC01P052280 ZFYVE9
GH01I052328 Enhancer 0.6 ENCODE 11.5 -39.9 -39892 0.2 SMARCE1 PKNOX1 FOXA2 MAFG DPF2 MAFF ZNF316 SMARCA4 NFE2 FOS PLA2G12AP1 CC2D1B TXNDC12-AS1 GC01M052353 GC01M052352 GC01P052280 ZFYVE9
GH01I053144 Enhancer 1.3 Ensembl ENCODE dbSUPER 4 +778.2 778217 3.9 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF48 ETS1 YY1 FOS ATF7 SLC1A7 PODN GPX7 PLA2G12AP1 LOC105378724
GH01I053132 Enhancer 1.2 Ensembl ENCODE dbSUPER 4.1 +765.7 765678 4.4 BCOR MEIS2 USF1 ZMYM3 CEBPG FOSL1 ZNF766 POLR2A ADNP CBFA2T2 MAGOH NDC1 ENSG00000230953 PODN SLC1A7 LRRC42 ZCCHC11 RPS13P2 ECHDC2 PLA2G12AP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PLA2G12AP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PLA2G12AP1 Gene

Genomic Locations for PLA2G12AP1 Gene
chr1:52,368,676-52,369,244
(GRCh38/hg38)
Size:
569 bases
Orientation:
Plus strand
chr1:52,834,348-52,834,916
(GRCh37/hg19)

Genomic View for PLA2G12AP1 Gene

Genes around PLA2G12AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PLA2G12AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PLA2G12AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PLA2G12AP1 Gene

Proteins for PLA2G12AP1 Gene

Post-translational modifications for PLA2G12AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PLA2G12AP1 Gene

Domains & Families for PLA2G12AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PLA2G12AP1 Gene

Function for PLA2G12AP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PLA2G12AP1 Gene

Localization for PLA2G12AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PLA2G12AP1 Gene

Pathways & Interactions for PLA2G12AP1 Gene

SuperPathways for PLA2G12AP1 Gene

No Data Available

Interacting Proteins for PLA2G12AP1 Gene

Gene Ontology (GO) - Biological Process for PLA2G12AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PLA2G12AP1 Gene

Drugs & Compounds for PLA2G12AP1 Gene

No Compound Related Data Available

Transcripts for PLA2G12AP1 Gene

mRNA/cDNA for PLA2G12AP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for PLA2G12AP1 Gene

No ASD Table

Relevant External Links for PLA2G12AP1 Gene

GeneLoc Exon Structure for
PLA2G12AP1
ECgene alternative splicing isoforms for
PLA2G12AP1

Expression for PLA2G12AP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for PLA2G12AP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of PLA2G12AP1 Gene:

PLA2G12AP1
genes like me logo Genes that share expression patterns with PLA2G12AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PLA2G12AP1 Gene

Orthologs for PLA2G12AP1 Gene

Evolution for PLA2G12AP1 Gene

ENSEMBL:
Gene Tree for PLA2G12AP1 (if available)
TreeFam:
Gene Tree for PLA2G12AP1 (if available)

No data available for Orthologs for PLA2G12AP1 Gene

Paralogs for PLA2G12AP1 Gene

No data available for Paralogs for PLA2G12AP1 Gene

Variants for PLA2G12AP1 Gene

Additional Variant Information for PLA2G12AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PLA2G12AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PLA2G12AP1 Gene

Disorders for PLA2G12AP1 Gene

Additional Disease Information for PLA2G12AP1

No disorders were found for PLA2G12AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for PLA2G12AP1 Gene

Publications for PLA2G12AP1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for PLA2G12AP1 Gene

Sources for PLA2G12AP1 Gene

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