Aliases for PKP2P1 Gene

Aliases for PKP2P1 Gene

  • Plakophilin 2 Pseudogene 1 2 3

External Ids for PKP2P1 Gene

Previous GeneCards Identifiers for PKP2P1 Gene

  • GC12U990196
  • GC00U912970
  • GC12P006458
  • GC12P006459
  • GC12P006460
  • GC12P006586

Summaries for PKP2P1 Gene

GeneCards Summary for PKP2P1 Gene

PKP2P1 (Plakophilin 2 Pseudogene 1) is a Pseudogene.

Additional gene information for PKP2P1 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for PKP2P1 Gene

Genomics for PKP2P1 Gene

GeneHancer (GH) Regulatory Elements for PKP2P1 Gene

Promoters and enhancers for PKP2P1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J006476 Enhancer 0.3 Ensembl ENCODE 500.7 -0.9 -938 1.4 ENSG00000256913 PKP2P1 piR-31432-101 piR-45504-098 piR-45504-099 piR-53431-102 piR-43099-099 piR-54764-100 piR-58156-018 TAPBPL
GH12J006477 Enhancer 0.2 FANTOM5 500.7 +0.2 161 0.3 ENSG00000256913 PKP2P1 piR-45504-099 piR-43099-099 CD27-AS1 TAPBPL CD27 IFFO1 NOP2 CHD4
GH12J006478 Enhancer 0.2 ENCODE 500.7 +1.2 1229 0.8 ENSG00000256913 PKP2P1 TAPBPL CD27-AS1 SCARNA10 CD27 IFFO1 NOP2 CHD4 VAMP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PKP2P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PKP2P1 Gene

Genomic Locations for PKP2P1 Gene
chr12:6,477,639-6,482,189
(GRCh38/hg38)
Size:
4,551 bases
Orientation:
Plus strand
chr12:6,586,805-6,591,355
(GRCh37/hg19)
Size:
4,551 bases
Orientation:
Plus strand

Genomic View for PKP2P1 Gene

Genes around PKP2P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
PKP2P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PKP2P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for PKP2P1 Gene

Proteins for PKP2P1 Gene

Post-translational modifications for PKP2P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PKP2P1 Gene

Domains & Families for PKP2P1 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for PKP2P1 Gene

Function for PKP2P1 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PKP2P1 Gene

Localization for PKP2P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PKP2P1 Gene

Pathways & Interactions for PKP2P1 Gene

PathCards logo

SuperPathways for PKP2P1 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for PKP2P1 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for PKP2P1 Gene

Drugs & Compounds for PKP2P1 Gene

No Compound Related Data Available

Transcripts for PKP2P1 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for PKP2P1 Gene

No ASD Table

Relevant External Links for PKP2P1 Gene

GeneLoc Exon Structure for
PKP2P1

No data available for mRNA/cDNA for PKP2P1 Gene

Expression for PKP2P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for PKP2P1 Gene

mRNA differential expression in normal tissues according to GTEx for PKP2P1 Gene

This gene is overexpressed in Heart - Left Ventricle (x8.9).
genes like me logo Genes that share expression patterns with PKP2P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PKP2P1 Gene

Orthologs for PKP2P1 Gene

No data available for Orthologs and Evolution for PKP2P1 Gene

Paralogs for PKP2P1 Gene

No data available for Paralogs for PKP2P1 Gene

Variants for PKP2P1 Gene

Additional Variant Information for PKP2P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
PKP2P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for PKP2P1 Gene

Disorders for PKP2P1 Gene

No disorders were found for PKP2P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PKP2P1 Gene

Publications for PKP2P1 Gene

  1. Assignment of the plakophilin-2 gene (PKP2) and a plakophilin-2 pseudogene (PKP2P1) to human chromosome bands 12p11 and 12p13, respectively, by in situ hybridization. (PMID: 10828611) Bonné S … van Roy F (Cytogenetics and cell genetics 2000) 2 3 23 54

Products for PKP2P1 Gene

Sources for PKP2P1 Gene