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Aliases for PIR63048 Gene

Subcategory (RNA class) for PIR63048 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR63048 Gene

No Aliases found

ORGUL Members for PIR63048 Gene

Previous GeneCards Identifiers for PIR63048 Gene

  • GC04P010121
  • GC04P010289
  • GC04P010567
  • GC04P010723
  • GC04P010914
  • GC04P010418
  • GC04P010899
  • GC04P012483
  • GC04P011216
  • GC04P011367
  • GC04P011529
  • GC04P011688
  • GC04P011872
  • GC04P012000
  • GC04P012158
  • GC04P012322

No data available for External Ids for PIR63048 Gene

Summaries for PIR63048 Gene

GeneCards Summary for PIR63048 Gene

PIR63048 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR63048 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR63048

Additional gene information for PIR63048 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR63048 Gene

Genomics for PIR63048 Gene

GeneHancer (GH) Regulatory Elements for PIR63048 Gene

Promoters and enhancers for PIR63048 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J010114 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 600.7 +0.8 787 10.6 SP1 ZNF652 ZFX ELF3 MNT ZNF148 NKRF POLR2A MLLT1 CEBPG WDR1 GC04P012848 GC04P012859 GC04P012866 GC04P012867 GC04P012873 GC04P012877 GC04P012891 GC04P012893 GC04P010117
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR63048 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR63048 Gene

Genomic Locations for PIR63048 Gene
chr4:10,118,792-10,118,824
(GRCh38/hg38)
Size:
33 bases
Orientation:
Plus strand
chr4:10,120,416-10,120,448
(GRCh37/hg19)
Size:
33 bases
Orientation:
Plus strand

Genomic View for PIR63048 Gene

Genes around PIR63048 on UCSC Golden Path with GeneCards custom track

PIR63048 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR63048 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR63048 Gene

ORGUL Member Location for PIR63048 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR63048 Gene

Proteins for PIR63048 Gene

Post-translational modifications for PIR63048 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR63048 Gene

Domains & Families for PIR63048 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR63048 Gene

Function for PIR63048 Gene

Phenotypes From GWAS Catalog for PIR63048 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR63048 Gene

Localization for PIR63048 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR63048 Gene

Pathways & Interactions for PIR63048 Gene

PathCards logo

SuperPathways for PIR63048 Gene

No Data Available

Interacting Proteins for PIR63048 Gene

Gene Ontology (GO) - Biological Process for PIR63048 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR63048 Gene

Drugs & Compounds for PIR63048 Gene

No Compound Related Data Available

Transcripts for PIR63048 Gene

fRNAdb Secondary structures for PIR63048 Gene

  • FR150160

Alternative Splicing Database (ASD) splice patterns (SP) for PIR63048 Gene

No ASD Table

Relevant External Links for PIR63048 Gene

GeneLoc Exon Structure for
PIR63048

No data available for mRNA/cDNA for PIR63048 Gene

Expression for PIR63048 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR63048 Gene

Orthologs for PIR63048 Gene

No data available for Orthologs and Evolution for PIR63048 Gene

Paralogs for PIR63048 Gene

No data available for Paralogs for PIR63048 Gene

Variants for PIR63048 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR63048 Gene

Disorders for PIR63048 Gene

No disorders were found for PIR63048 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR63048 Gene

Publications for PIR63048 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR63048 Gene

Products for PIR63048 Gene

Sources for PIR63048 Gene

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