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Aliases for PIR62869 Gene

Subcategory (RNA class) for PIR62869 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR62869 Gene

No Aliases found

ORGUL Members for PIR62869 Gene

Previous GeneCards Identifiers for PIR62869 Gene

  • GC20P037915

No data available for External Ids for PIR62869 Gene

Summaries for PIR62869 Gene

GeneCards Summary for PIR62869 Gene

PIR62869 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62869 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR62869 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62869 Gene

Genomics for PIR62869 Gene

GeneHancer (GH) Regulatory Elements for PIR62869 Gene

Promoters and enhancers for PIR62869 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J039285 Enhancer 0.2 Ensembl 600.7 -1.1 -1066 0.6 PIR62869 LINC01734
GH20J039286 Enhancer 0.2 Ensembl 600.7 +0.9 934 2.6 PIR62869 DHX35 GC20M039329
GH20J039282 Enhancer 0.9 Ensembl ENCODE 0.7 -3.5 -3469 0.6 SP1 PKNOX1 ZBTB8A ZIC2 ZEB2 ZNF341 OSR2 ZNF423 ZFHX2 HIC1 PIR62869 LINC01734
GH20J039289 Enhancer 0.6 Ensembl ENCODE 0.7 +3.8 3834 2 CTCF RAD21 NR2F1 PIR62869 GC20M039329
GH20J039267 Enhancer 1 Ensembl ENCODE dbSUPER 0.4 -17.5 -17498 1.9 CC2D1A CTCF RAD21 ZNF143 REST TRIM22 TGIF2 USF1 SMC3 GABPB1 PIR62869 LINC01734
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR62869 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR62869 Gene

Genomic Locations for PIR62869 Gene
chr20:39,286,367-39,286,395
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr20:37,915,010-37,915,038
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR62869 Gene

Genes around PIR62869 on UCSC Golden Path with GeneCards custom track

PIR62869 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62869 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62869 Gene

Proteins for PIR62869 Gene

Post-translational modifications for PIR62869 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR62869 Gene

Domains & Families for PIR62869 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR62869 Gene

Function for PIR62869 Gene

Phenotypes From GWAS Catalog for PIR62869 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62869 Gene

Localization for PIR62869 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR62869 Gene

Pathways & Interactions for PIR62869 Gene

PathCards logo

SuperPathways for PIR62869 Gene

No Data Available

Interacting Proteins for PIR62869 Gene

Gene Ontology (GO) - Biological Process for PIR62869 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62869 Gene

Drugs & Compounds for PIR62869 Gene

No Compound Related Data Available

Transcripts for PIR62869 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62869 Gene

No ASD Table

Relevant External Links for PIR62869 Gene

GeneLoc Exon Structure for
PIR62869

No data available for mRNA/cDNA for PIR62869 Gene

Expression for PIR62869 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62869 Gene

Orthologs for PIR62869 Gene

No data available for Orthologs and Evolution for PIR62869 Gene

Paralogs for PIR62869 Gene

No data available for Paralogs for PIR62869 Gene

Variants for PIR62869 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR62869 Gene

Disorders for PIR62869 Gene

No disorders were found for PIR62869 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62869 Gene

Publications for PIR62869 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR62869 Gene

Products for PIR62869 Gene

Sources for PIR62869 Gene

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