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Aliases for PIR62748 Gene

Subcategory (RNA class) for PIR62748 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR62748 Gene

No Aliases found

ORGUL Members for PIR62748 Gene

Previous GeneCards Identifiers for PIR62748 Gene

  • GC12M123331

No data available for External Ids for PIR62748 Gene

Summaries for PIR62748 Gene

GeneCards Summary for PIR62748 Gene

PIR62748 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62748 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR62748 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62748 Gene

Genomics for PIR62748 Gene

GeneHancer (GH) Regulatory Elements for PIR62748 Gene

Promoters and enhancers for PIR62748 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J122844 Enhancer 0.4 dbSUPER 650.7 0.0 -13 6.3 GATA3 ZNF687 ZIC2 PIR62748 VPS37B ENSG00000256092 PITPNM2 PITPNM2-AS1 CDK2AP1 ABCB9 B3GNT4 PIR52335 HIP1R
GH12J122834 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE dbSUPER 0.4 +8.5 8530 9.3 PKNOX1 FOXA2 ARID4B SIN3A YBX1 FEZF1 ZNF2 YY1 ZNF213 FOS HIP1R VPS37B ATP6V0A2 TCTN2 ABCB9 B3GNT4 PIR62748
GH12J122851 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 -5.1 -5142 1.6 PHF21A JUN FOS CHD2 VPS37B B3GNT4 PIR52335 PIR62748 HIP1R
GH12J122850 Enhancer 0.4 dbSUPER 0.7 -3.9 -3877 0.7 ZFHX2 MNT EGR2 VPS37B PIR62748 PIR52335 HIP1R
GH12J122853 Enhancer 0.6 dbSUPER 0.4 -8.2 -8191 4.3 FOXA2 FOXA3 CEBPG ZIC2 ATF2 ZNF7 HIC1 SP1 CTBP1 ZNF629 PIR52335 VPS37B CDK2AP1 B3GNT4 PIR62748 HIP1R
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR62748 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR62748 Gene

Genomic Locations for PIR62748 Gene
chr12:122,847,249-122,847,276
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr12:123,331,796-123,331,823
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR62748 Gene

Genes around PIR62748 on UCSC Golden Path with GeneCards custom track

PIR62748 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62748 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62748 Gene

Function for PIR62748 Gene

Phenotypes From GWAS Catalog for PIR62748 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62748 Gene

Localization for PIR62748 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR62748 Gene

Pathways & Interactions for PIR62748 Gene

SuperPathways for PIR62748 Gene

No Data Available

Interacting Proteins for PIR62748 Gene

Gene Ontology (GO) - Biological Process for PIR62748 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62748 Gene

Drugs & Compounds for PIR62748 Gene

No Compound Related Data Available

Transcripts for PIR62748 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62748 Gene

No ASD Table

Relevant External Links for PIR62748 Gene

GeneLoc Exon Structure for
PIR62748

No data available for mRNA/cDNA for PIR62748 Gene

Expression for PIR62748 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62748 Gene

Orthologs for PIR62748 Gene

No data available for Orthologs and Evolution for PIR62748 Gene

Paralogs for PIR62748 Gene

No data available for Paralogs for PIR62748 Gene

Variants for PIR62748 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR62748 Gene

Disorders for PIR62748 Gene

No disorders were found for PIR62748 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62748 Gene

Publications for PIR62748 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR62748 Gene

Sources for PIR62748 Gene

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