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Aliases for PIR62708 Gene

Subcategory (RNA class) for PIR62708 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR62708 Gene

No Aliases found

ORGUL Members for PIR62708 Gene

Previous GeneCards Identifiers for PIR62708 Gene

  • GC09P115275

No data available for External Ids for PIR62708 Gene

Summaries for PIR62708 Gene

GeneCards Summary for PIR62708 Gene

PIR62708 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62708 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR62708 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62708 Gene

Genomics for PIR62708 Gene

GeneHancer (GH) Regulatory Elements for PIR62708 Gene

Promoters and enhancers for PIR62708 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09J112495 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -17.1 -17105 1.5 ELF3 FOXA2 ARID4B RAD21 RARA ETS1 YY1 EGR1 CREM THAP11 INIP SUSD1 SNX30 PTBP3 C9orf147 KIAA1958 PIR62708
GH09J112504 Enhancer 0.8 ENCODE 0.4 -7.0 -6955 3.9 FOXA2 ARID4B RARA MIXL1 HMG20B RXRA SP5 PPARG NFIL3 SP1 HSDL2 SNX30 ENSG00000226609 PIR62708 KIAA1958 C9orf147
GH09J112545 Enhancer 1 Ensembl ENCODE 0.3 +33.8 33830 2.6 PKNOX1 ARNT TCF12 ZNF766 EGR1 ATF7 CREM REST ZNF592 ZNF148 SUSD1 PIR62708 ENSG00000250068 KIAA1958
GH09J112554 Enhancer 0.9 Ensembl ENCODE 0.3 +42.8 42832 2.9 PKNOX1 TFAP4 SAP130 ARID4B MAX RAD21 YY1 GATA3 SCRT2 HNF4G HSDL2 INIP ENSG00000226609 SNX30 ENSG00000250068 PIR62708 KIAA1958
GH09J112531 Enhancer 0.6 Ensembl ENCODE 0.4 +18.6 18623 0.5 SP1 HNF4G HNF4A PIR62708 KIAA1958 ENSG00000250068
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR62708 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR62708 Gene

Genomic Locations for PIR62708 Gene
chr9:112,513,342-112,513,371
(GRCh38/hg38)
Size:
30 bases
Orientation:
Plus strand
chr9:115,275,622-115,275,651
(GRCh37/hg19)
Size:
30 bases
Orientation:
Plus strand

Genomic View for PIR62708 Gene

Genes around PIR62708 on UCSC Golden Path with GeneCards custom track

PIR62708 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62708 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62708 Gene

Function for PIR62708 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62708 Gene

Localization for PIR62708 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR62708 Gene

Pathways & Interactions for PIR62708 Gene

SuperPathways for PIR62708 Gene

No Data Available

Interacting Proteins for PIR62708 Gene

Gene Ontology (GO) - Biological Process for PIR62708 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62708 Gene

Drugs & Compounds for PIR62708 Gene

No Compound Related Data Available

Transcripts for PIR62708 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62708 Gene

No ASD Table

Relevant External Links for PIR62708 Gene

GeneLoc Exon Structure for
PIR62708

No data available for mRNA/cDNA for PIR62708 Gene

Expression for PIR62708 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62708 Gene

Orthologs for PIR62708 Gene

No data available for Orthologs and Evolution for PIR62708 Gene

Paralogs for PIR62708 Gene

No data available for Paralogs for PIR62708 Gene

Variants for PIR62708 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR62708 Gene

Disorders for PIR62708 Gene

No disorders were found for PIR62708 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62708 Gene

Publications for PIR62708 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR62708 Gene

Sources for PIR62708 Gene

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