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Aliases for PIR62526 Gene

Subcategory (RNA class) for PIR62526 Gene

piRNA

Quality Score for this RNA gene is

11

Aliases for PIR62526 Gene

No Aliases found

ORGUL Members for PIR62526 Gene

Previous GeneCards Identifiers for PIR62526 Gene

  • GC22P039918

No data available for External Ids for PIR62526 Gene

Summaries for PIR62526 Gene

GeneCards Summary for PIR62526 Gene

PIR62526 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62526 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR62526

Additional gene information for PIR62526 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62526 Gene

Genomics for PIR62526 Gene

GeneHancer (GH) Regulatory Elements for PIR62526 Gene

Promoters and enhancers for PIR62526 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22I039518 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.8 +2.3 2262 12.3 MLX DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 ZNF548 SP3 ATF4 ENSG00000272834 ENSG00000230912 RPL3 TAB1 CBY1 SNORD83B ENSG00000228274 CBX6 CBX7
GH22I039530 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 +10.0 10010 2.7 HDGF FOXA2 PKNOX1 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B E2F8 RPS19BP1 PIR58856 ATF4 RPL3 TNRC6B ENSG00000228274 PIR62526 GC22P039523
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR62526 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR62526 Gene

Genomic Locations for PIR62526 Gene
chr22:39,522,121-39,522,152
(GRCh38/hg38)
Size:
32 bases
Orientation:
Plus strand
chr22:39,918,126-39,918,157
(GRCh37/hg19)

Genomic View for PIR62526 Gene

Genes around PIR62526 on UCSC Golden Path with GeneCards custom track

PIR62526 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62526 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR62526 Gene

ORGUL Member Location for PIR62526 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62526 Gene

Proteins for PIR62526 Gene

Post-translational modifications for PIR62526 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR62526 Gene

Domains & Families for PIR62526 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR62526 Gene

Function for PIR62526 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62526 Gene

Localization for PIR62526 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR62526 Gene

Pathways & Interactions for PIR62526 Gene

SuperPathways for PIR62526 Gene

No Data Available

Interacting Proteins for PIR62526 Gene

Gene Ontology (GO) - Biological Process for PIR62526 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62526 Gene

Drugs & Compounds for PIR62526 Gene

No Compound Related Data Available

Transcripts for PIR62526 Gene

fRNAdb Secondary structures for PIR62526 Gene

  • FR151135

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62526 Gene

No ASD Table

Relevant External Links for PIR62526 Gene

GeneLoc Exon Structure for
PIR62526

No data available for mRNA/cDNA for PIR62526 Gene

Expression for PIR62526 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62526 Gene

Orthologs for PIR62526 Gene

No data available for Orthologs and Evolution for PIR62526 Gene

Paralogs for PIR62526 Gene

No data available for Paralogs for PIR62526 Gene

Variants for PIR62526 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR62526 Gene

Disorders for PIR62526 Gene

No disorders were found for PIR62526 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62526 Gene

Publications for PIR62526 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR62526 Gene

Sources for PIR62526 Gene

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