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Aliases for PIR62106 Gene

Subcategory (RNA class) for PIR62106 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR62106 Gene

No Aliases found

ORGUL Members for PIR62106 Gene

Previous GeneCards Identifiers for PIR62106 Gene

  • GC21M036592

No data available for External Ids for PIR62106 Gene

Summaries for PIR62106 Gene

GeneCards Summary for PIR62106 Gene

PIR62106 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR62106 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR62106 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR62106 Gene

Genomics for PIR62106 Gene

GeneHancer (GH) Regulatory Elements for PIR62106 Gene

Promoters and enhancers for PIR62106 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J035215 Enhancer 1.2 Ensembl ENCODE dbSUPER 600.7 -0.7 -689 6.1 ZKSCAN8 NCOA3 TRIM24 CREB1 CEBPG TARDBP GTF2E2 CTBP1 ZNF316 EP300 PIR62106 MEMO1P1 PIR41155 RUNX1
GH21J035202 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.2 9225 12.4 ZFX CC2D1A ZKSCAN8 CBFA2T2 ZNF148 MLLT1 GTF2F1 CDC5L MCM2 TRIM24 SETD4 RIMKLBP1 RPL23AP3 LINC01426 LINC01436 PIR62106 ENSG00000234703 RUNX1
GH21J035225 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 0.4 -9.5 -9462 2.6 ZFX SP1 CEBPG RXRA RXRB SMARCC1 SMARCC2 CEBPB SCRT2 SMARCB1 PIR62106 PIR41155 RUNX1
GH21J035231 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -15.1 -15129 1.8 CBFA2T2 MLLT1 TRIM24 EGR1 SMARCA4 FOSL2 CREB1 DPF2 ZSCAN4 LEF1 SETD4 KCNE1 PIR62106 PIR41155 RUNX1
GH21J035196 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 +19.5 19462 3.4 MAFK CEBPB SCRT2 JUN SP1 NFE2 ZNF766 JUND MAX FOS SETD4 PIR62106 ENSG00000234703 RUNX1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR62106 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR62106 Gene

Genomic Locations for PIR62106 Gene
chr21:35,217,536-35,217,563
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr21:36,589,833-36,589,860
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR62106 Gene

Genes around PIR62106 on UCSC Golden Path with GeneCards custom track

PIR62106 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR62106 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR62106 Gene

Proteins for PIR62106 Gene

Post-translational modifications for PIR62106 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR62106 Gene

Domains & Families for PIR62106 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR62106 Gene

Function for PIR62106 Gene

Phenotypes From GWAS Catalog for PIR62106 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR62106 Gene

Localization for PIR62106 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR62106 Gene

Pathways & Interactions for PIR62106 Gene

PathCards logo

SuperPathways for PIR62106 Gene

No Data Available

Interacting Proteins for PIR62106 Gene

Gene Ontology (GO) - Biological Process for PIR62106 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR62106 Gene

Drugs & Compounds for PIR62106 Gene

No Compound Related Data Available

Transcripts for PIR62106 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR62106 Gene

No ASD Table

Relevant External Links for PIR62106 Gene

GeneLoc Exon Structure for
PIR62106

No data available for mRNA/cDNA for PIR62106 Gene

Expression for PIR62106 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR62106 Gene

Orthologs for PIR62106 Gene

No data available for Orthologs and Evolution for PIR62106 Gene

Paralogs for PIR62106 Gene

No data available for Paralogs for PIR62106 Gene

Variants for PIR62106 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR62106 Gene

Disorders for PIR62106 Gene

No disorders were found for PIR62106 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR62106 Gene

Publications for PIR62106 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR62106 Gene

Products for PIR62106 Gene

Sources for PIR62106 Gene

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