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Aliases for PIR61218 Gene

Subcategory (RNA class) for PIR61218 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR61218 Gene

No Aliases found

ORGUL Members for PIR61218 Gene

Previous GeneCards Identifiers for PIR61218 Gene

  • GC22M024944
  • GC22M024566
  • GC22M024635
  • GC22M026634
  • GC22M025253
  • GC22M025448
  • GC22M025629
  • GC22M025815
  • GC22M026000
  • GC22M026180
  • GC22M026357
  • GC22M026540

No data available for External Ids for PIR61218 Gene

Summaries for PIR61218 Gene

GeneCards Summary for PIR61218 Gene

PIR61218 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR61218 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR61218 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR61218 Gene

Genomics for PIR61218 Gene

GeneHancer (GH) Regulatory Elements for PIR61218 Gene

Promoters and enhancers for PIR61218 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH22J024547 Enhancer 0.2 dbSUPER 600.7 +1.2 1191 0.7 PIR61218 ENSG00000228923 UPB1 ADORA2A SPECC1L ADORA2A-AS1 SUSD2 GUCD1 GC22P024540
GH22J024548 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.7 -4.5 -4502 8.9 ZNF652 SP1 ZFX ELF3 MNT SIX5 NKRF POLR2A ZNF121 CEBPG GGT1 SNRPD3 GUCD1 ENSG00000272973 SGSM1 UPB1 ADORA2A SLC2A11 ENSG00000228923 SMARCB1
GH22J024544 Enhancer 1 Ensembl ENCODE dbSUPER 0.7 +3.5 3473 2 SP1 RXRA SCRT2 JUND SCRT1 YY1 ZBTB33 USF2 HNF4A MAX ENSG00000228923 UPB1 ADORA2A SPECC1L ADORA2A-AS1 BCRP3 POM121L9P PIR61218 GC22P024540 GUCD1
GH22J024541 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +6.2 6236 2.2 RXRA SP1 NR2F1 RAD21 BATF MAX POLR2A UPB1 ADORA2A-AS1 BCRP3 GUCD1 POM121L9P GC22P024540 PIR61218
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR61218 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR61218 Gene

Genomic Locations for PIR61218 Gene
chr22:24,548,933-24,548,960
(GRCh38/hg38)
Size:
28 bases
Orientation:
Minus strand
chr22:24,944,901-24,944,928
(GRCh37/hg19)
Size:
28 bases
Orientation:
Minus strand

Genomic View for PIR61218 Gene

Genes around PIR61218 on UCSC Golden Path with GeneCards custom track

PIR61218 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR61218 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR61218 Gene

Proteins for PIR61218 Gene

Post-translational modifications for PIR61218 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR61218 Gene

Domains & Families for PIR61218 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR61218 Gene

Function for PIR61218 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR61218 Gene

Localization for PIR61218 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR61218 Gene

Pathways & Interactions for PIR61218 Gene

PathCards logo

SuperPathways for PIR61218 Gene

No Data Available

Interacting Proteins for PIR61218 Gene

Gene Ontology (GO) - Biological Process for PIR61218 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR61218 Gene

Drugs & Compounds for PIR61218 Gene

No Compound Related Data Available

Transcripts for PIR61218 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR61218 Gene

No ASD Table

Relevant External Links for PIR61218 Gene

GeneLoc Exon Structure for
PIR61218

No data available for mRNA/cDNA for PIR61218 Gene

Expression for PIR61218 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR61218 Gene

Orthologs for PIR61218 Gene

No data available for Orthologs and Evolution for PIR61218 Gene

Paralogs for PIR61218 Gene

No data available for Paralogs for PIR61218 Gene

Variants for PIR61218 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR61218 Gene

Disorders for PIR61218 Gene

No disorders were found for PIR61218 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR61218 Gene

Publications for PIR61218 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR61218 Gene

Products for PIR61218 Gene

Sources for PIR61218 Gene

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