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Aliases for PIR61027 Gene

Subcategory (RNA class) for PIR61027 Gene

piRNA

Quality Score for this RNA gene is

24

Aliases for PIR61027 Gene

No Aliases found

ORGUL Members for PIR61027 Gene

Previous GeneCards Identifiers for PIR61027 Gene

  • GC17M008089
  • GC17M008211
  • GC17M008259
  • GC17M008306
  • GC17M008341
  • GC17M008370
  • GC17M008416
  • GC17M008448
  • GC17M008489

No data available for External Ids for PIR61027 Gene

Summaries for PIR61027 Gene

GeneCards Summary for PIR61027 Gene

PIR61027 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR61027 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR61027

Additional gene information for PIR61027 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR61027 Gene

Genomics for PIR61027 Gene

GeneHancer (GH) Regulatory Elements for PIR61027 Gene

Promoters and enhancers for PIR61027 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J008185 Promoter/Enhancer 1.9 Ensembl ENCODE dbSUPER 0.7 -2.3 -2264 5.9 CLOCK MLX ZFP64 IRF4 YY1 ZNF213 E2F8 ZNF143 SP3 NFYC ENSG00000279152 GC17M008547 GC17M008549 MIR4521 PIR38375 PIR38980 PIR40201 PIR49700 TRI-AAT5-5 TRS-GCT4-3
GH17J008181 Enhancer 0.6 ENCODE 0.7 +4.0 4022 0.2 SMARCA5 CTCF SAP130 ARID4B REST RAD21 ZNF217 ZNF692 SMC3 ZSCAN29 PER1 AURKB HES7 LINC00324 GC17M008550 PIR61027 LOC105371520 TMEM107
GH17J008182 Enhancer 0.6 ENCODE 0.7 +3.8 3772 0.2 SMARCA5 CTCF REST ZNF217 ZNF692 ZSCAN29 MLLT1 CUX1 PRDM10 PER1 AURKB HES7 LINC00324 GC17M008550 PIR61027 LOC105371520 TMEM107
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR61027 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR61027 Gene

Genomic Locations for PIR61027 Gene
chr17:8,186,040-8,186,070
(GRCh38/hg38)
Size:
31 bases
Orientation:
Minus strand
chr17:8,089,358-8,089,388
(GRCh37/hg19)
Size:
31 bases
Orientation:
Minus strand

Genomic View for PIR61027 Gene

Genes around PIR61027 on UCSC Golden Path with GeneCards custom track

PIR61027 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR61027 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR61027 Gene

ORGUL Member Location for PIR61027 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR61027 Gene

Function for PIR61027 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR61027 Gene

Localization for PIR61027 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR61027 Gene

Pathways & Interactions for PIR61027 Gene

SuperPathways for PIR61027 Gene

No Data Available

Interacting Proteins for PIR61027 Gene

Gene Ontology (GO) - Biological Process for PIR61027 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR61027 Gene

Drugs & Compounds for PIR61027 Gene

No Compound Related Data Available

Transcripts for PIR61027 Gene

fRNAdb Secondary structures for PIR61027 Gene

  • FR018257

Alternative Splicing Database (ASD) splice patterns (SP) for PIR61027 Gene

No ASD Table

Relevant External Links for PIR61027 Gene

GeneLoc Exon Structure for
PIR61027

No data available for mRNA/cDNA for PIR61027 Gene

Expression for PIR61027 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR61027 Gene

Orthologs for PIR61027 Gene

No data available for Orthologs and Evolution for PIR61027 Gene

Paralogs for PIR61027 Gene

No data available for Paralogs for PIR61027 Gene

Variants for PIR61027 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR61027 Gene

Disorders for PIR61027 Gene

No disorders were found for PIR61027 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR61027 Gene

Publications for PIR61027 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR61027 Gene

Sources for PIR61027 Gene

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