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Aliases for PIR60789 Gene

Subcategory (RNA class) for PIR60789 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR60789 Gene

No Aliases found

ORGUL Members for PIR60789 Gene

No data available for External Ids for PIR60789 Gene

Summaries for PIR60789 Gene

GeneCards Summary for PIR60789 Gene

PIR60789 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60789 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR60789 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60789 Gene

Genomics for PIR60789 Gene

GeneHancer (GH) Regulatory Elements for PIR60789 Gene

Promoters and enhancers for PIR60789 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J013480 Enhancer 0.6 Ensembl 600.7 +1.2 1210 0.7 SP5 PKNOX1 ZNF316 CTCF MAFK EGR1 FOXA2 FOXA1 PIR60789 ENSG00000255401
GH11J013478 Enhancer 0.2 Ensembl 600.7 -0.5 -549 0.8 ENSG00000254583 PIR60789
GH11J013487 Enhancer 0.8 ENCODE 0.4 +8.2 8169 0.2 CC2D1A CTCF AHR ZNF644 KAT8 GATAD2A KMT2B KAT7 ZBTB26 YY1 ENSG00000255401 BTBD10 PIR60789
GH11J013488 Enhancer 0.6 ENCODE 0.4 +8.7 8669 0.2 CTCF KAT8 SCRT2 YY1 SAP130 ZNF792 RAD21 ZGPAT TFAP4 HOMEZ ENSG00000255401 PIR60789
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR60789 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR60789 Gene

Genomic Locations for PIR60789 Gene
chr11:13,479,150-13,479,178
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr11:13,500,697-13,500,725
(GRCh37/hg19)
Size:
29 bases
Orientation:
Plus strand

Genomic View for PIR60789 Gene

Genes around PIR60789 on UCSC Golden Path with GeneCards custom track

PIR60789 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60789 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60789 Gene

Proteins for PIR60789 Gene

Post-translational modifications for PIR60789 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60789 Gene

Domains & Families for PIR60789 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60789 Gene

Function for PIR60789 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60789 Gene

Localization for PIR60789 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60789 Gene

Pathways & Interactions for PIR60789 Gene

PathCards logo

SuperPathways for PIR60789 Gene

No Data Available

Interacting Proteins for PIR60789 Gene

Gene Ontology (GO) - Biological Process for PIR60789 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60789 Gene

Drugs & Compounds for PIR60789 Gene

No Compound Related Data Available

Transcripts for PIR60789 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60789 Gene

No ASD Table

Relevant External Links for PIR60789 Gene

GeneLoc Exon Structure for
PIR60789

No data available for mRNA/cDNA for PIR60789 Gene

Expression for PIR60789 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60789 Gene

Orthologs for PIR60789 Gene

No data available for Orthologs and Evolution for PIR60789 Gene

Paralogs for PIR60789 Gene

No data available for Paralogs for PIR60789 Gene

Variants for PIR60789 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR60789 Gene

Disorders for PIR60789 Gene

No disorders were found for PIR60789 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60789 Gene

Publications for PIR60789 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR60789 Gene

Products for PIR60789 Gene

Sources for PIR60789 Gene

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