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Aliases for PIR60456 Gene

Subcategory (RNA class) for PIR60456 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR60456 Gene

No Aliases found

ORGUL Members for PIR60456 Gene

Previous GeneCards Identifiers for PIR60456 Gene

  • GC14P104685

No data available for External Ids for PIR60456 Gene

Summaries for PIR60456 Gene

GeneCards Summary for PIR60456 Gene

PIR60456 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60456 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR60456 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60456 Gene

Genomics for PIR60456 Gene

GeneHancer (GH) Regulatory Elements for PIR60456 Gene

Promoters and enhancers for PIR60456 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14J104220 Promoter 0.7 Ensembl 600.7 +1.1 1069 0.2 ZNF148 GABPA NR2C2 PIR60456 LOC105370693 LINC02691 GC14P104161
GH14J104205 Enhancer 0.9 Ensembl ENCODE 0.4 -13.0 -12984 1.1 YY1 SP7 SP5 GLIS2 ZBTB8A ZIC2 ZSCAN4 PATZ1 TCF7L2 MNT PIR60456 GC14P104161
GH14J104184 Enhancer 1 Ensembl ENCODE dbSUPER 0.3 -34.4 -34426 1.2 ZIC2 PATZ1 ZNF341 KLF4 NR2F2 ELF1 CTCF RAD21 KLF17 GLIS1 GC14P104161 PIR60456
GH14J104202 Enhancer 0.6 Ensembl 0.4 -16.9 -16931 0.2 NFIB GLIS2 ZIC2 ZFHX2 GATA3 ZNF335 HIC1 GLIS1 EGR2 PIR60456 GC14P104161
GH14J104169 Enhancer 0.9 ENCODE dbSUPER 0.3 -48.3 -48268 2.4 SP7 CREB1 ZBTB33 TARDBP CTBP1 MAZ KLF4 ESRRA ZNF217 DPF2 TRMT61A GC14P104161 KIF26A PIR60456
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR60456 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR60456 Gene

Genomic Locations for PIR60456 Gene
chr14:104,219,432-104,219,459
(GRCh38/hg38)
Size:
28 bases
Orientation:
Plus strand
chr14:104,685,769-104,685,796
(GRCh37/hg19)
Size:
28 bases
Orientation:
Plus strand

Genomic View for PIR60456 Gene

Genes around PIR60456 on UCSC Golden Path with GeneCards custom track

PIR60456 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60456 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60456 Gene

Proteins for PIR60456 Gene

Post-translational modifications for PIR60456 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60456 Gene

Domains & Families for PIR60456 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60456 Gene

Function for PIR60456 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60456 Gene

Localization for PIR60456 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60456 Gene

Pathways & Interactions for PIR60456 Gene

PathCards logo

SuperPathways for PIR60456 Gene

No Data Available

Interacting Proteins for PIR60456 Gene

Gene Ontology (GO) - Biological Process for PIR60456 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60456 Gene

Drugs & Compounds for PIR60456 Gene

No Compound Related Data Available

Transcripts for PIR60456 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60456 Gene

No ASD Table

Relevant External Links for PIR60456 Gene

GeneLoc Exon Structure for
PIR60456

No data available for mRNA/cDNA for PIR60456 Gene

Expression for PIR60456 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60456 Gene

Orthologs for PIR60456 Gene

No data available for Orthologs and Evolution for PIR60456 Gene

Paralogs for PIR60456 Gene

No data available for Paralogs for PIR60456 Gene

Variants for PIR60456 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR60456 Gene

Disorders for PIR60456 Gene

No disorders were found for PIR60456 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60456 Gene

Publications for PIR60456 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

No data available for External Links for PIR60456 Gene

Products for PIR60456 Gene

Sources for PIR60456 Gene

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