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Aliases for PIR60311 Gene

Subcategory (RNA class) for PIR60311 Gene

piRNA

Quality Score for this RNA gene is

6

Aliases for PIR60311 Gene

No Aliases found

ORGUL Members for PIR60311 Gene

Previous GeneCards Identifiers for PIR60311 Gene

  • GC17P038989

No data available for External Ids for PIR60311 Gene

Summaries for PIR60311 Gene

GeneCards Summary for PIR60311 Gene

PIR60311 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60311 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

View fRNAdb secondary structures for PIR60311

Additional gene information for PIR60311 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60311 Gene

Genomics for PIR60311 Gene

GeneHancer (GH) Regulatory Elements for PIR60311 Gene

Promoters and enhancers for PIR60311 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17I040827 Enhancer 1 ENCODE 0.8 -4.6 -4581 2.9 PKNOX1 SMAD1 ARNT FEZF1 ZNF2 POLR2B ZNF766 E2F8 REST ZNF592 P3H4 KRT27 KRT23 MED24 PIR60311 TMEM99 KRT10
GH17I040822 Promoter 1 EPDnew 0.4 -10.5 -10528 0.1 HDAC1 ZFHX2 ZNF316 POLR2A PATZ1 MAFK ZNF263 CEBPB MAFG KLF4 KRT10 TMEM99 GC17P040810 PIR60311
GH17I040825 Enhancer 0.6 ENCODE 0.4 -7.0 -6995 0.9 GATAD2A STAT1 ZNF449 JUN ZSCAN4 CEBPB EP300 ZNF592 ZNF664 NFIC TMEM99 KRT27 KRT23 MED24 KRT10 PIR60311 GC17P040810
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around PIR60311 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR60311 Gene

Genomic Locations for PIR60311 Gene
chr17:40,833,162-40,833,190
(GRCh38/hg38)
Size:
29 bases
Orientation:
Plus strand
chr17:38,989,414-38,989,442
(GRCh37/hg19)

Genomic View for PIR60311 Gene

Genes around PIR60311 on UCSC Golden Path with GeneCards custom track

PIR60311 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60311 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

ORGUL Member Location for PIR60311 Gene

ORGUL Member Location for PIR60311 gene

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60311 Gene

Proteins for PIR60311 Gene

Post-translational modifications for PIR60311 Gene

No Post-translational modifications

No data available for DME Specific Peptides for PIR60311 Gene

Domains & Families for PIR60311 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for PIR60311 Gene

Function for PIR60311 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60311 Gene

Localization for PIR60311 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60311 Gene

Pathways & Interactions for PIR60311 Gene

SuperPathways for PIR60311 Gene

No Data Available

Interacting Proteins for PIR60311 Gene

Gene Ontology (GO) - Biological Process for PIR60311 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60311 Gene

Drugs & Compounds for PIR60311 Gene

No Compound Related Data Available

Transcripts for PIR60311 Gene

fRNAdb Secondary structures for PIR60311 Gene

  • FR293025

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60311 Gene

No ASD Table

Relevant External Links for PIR60311 Gene

GeneLoc Exon Structure for
PIR60311

No data available for mRNA/cDNA for PIR60311 Gene

Expression for PIR60311 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60311 Gene

Orthologs for PIR60311 Gene

No data available for Orthologs and Evolution for PIR60311 Gene

Paralogs for PIR60311 Gene

No data available for Paralogs for PIR60311 Gene

Variants for PIR60311 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR60311 Gene

Disorders for PIR60311 Gene

No disorders were found for PIR60311 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60311 Gene

Publications for PIR60311 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR60311 Gene

Sources for PIR60311 Gene

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