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Aliases for PIR60294 Gene

Subcategory (RNA class) for PIR60294 Gene

piRNA

Quality Score for this RNA gene is

19

Aliases for PIR60294 Gene

No Aliases found

ORGUL Members for PIR60294 Gene

Previous GeneCards Identifiers for PIR60294 Gene

  • GC21M046271

No data available for External Ids for PIR60294 Gene

Summaries for PIR60294 Gene

GeneCards Summary for PIR60294 Gene

PIR60294 is an RNA Gene, and is affiliated with the piRNA class.

fRNAdb sequence ontologies for PIR60294 Gene

  • piRNA: A small non coding RNA, part of a silencing system that prevents the spreading of selfish genetic elements.

Additional gene information for PIR60294 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for PIR60294 Gene

Genomics for PIR60294 Gene

GeneHancer (GH) Regulatory Elements for PIR60294 Gene

Promoters and enhancers for PIR60294 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH21J044848 Enhancer 0.8 ENCODE dbSUPER 650.7 +1.4 1424 3.3 PAF1 SAP130 REST MNT ZNF48 POLR2A SCRT2 RBM22 ZNF8 SMAD4 GC21P044852 PIR60294 PTTG1IP UBE2G2 SUMO3 LINC01424 ADARB1 SSR4P1 SLC19A1 GC21P044820
GH21J044854 Enhancer 0.8 ENCODE dbSUPER 650.7 -1.8 -1845 0.2 KLF1 TAL1 NRF1 CBFA2T3 ZEB2 ZIC2 TCF12 GATA2 NCOR1 HDAC2 PIR60294 SUMO3 UBE2G2 LINC01424 PTTG1IP GC21P044820
GH21J044865 Promoter/Enhancer 2.8 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 0.4 -19.3 -19312 11.1 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 PTTG1IP ITGB2 PWP2 POFUT2 UBE2G2 TRPM2 PIR60294 GC21P044820
GH21J044853 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.7 -3.4 -3427 2.4 HDGF HNRNPUL1 PKNOX1 SMAD1 ATF1 ARNT TCF12 ZNF766 CBX5 GATA2 POFUT2 PTTG1IP ENSG00000184441 SUMO3 UBE2G2 LINC01424 PWP2 KRTAP12-4 PIR60294 GC21P044820
GH21J044857 Enhancer 0.8 ENCODE dbSUPER 0.4 -7.3 -7268 2.3 SMARCE1 SCRT1 PKNOX1 KLF1 SIN3A DPF2 MNT E2F1 GATA3 SCRT2 PTTG1IP PIR60294 GC21P044820
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around PIR60294 on UCSC Golden Path with GeneCards custom track

Genomic Locations for PIR60294 Gene

Genomic Locations for PIR60294 Gene
chr21:44,851,270-44,851,296
(GRCh38/hg38)
Size:
27 bases
Orientation:
Minus strand
chr21:46,271,185-46,271,211
(GRCh37/hg19)
Size:
27 bases
Orientation:
Minus strand

Genomic View for PIR60294 Gene

Genes around PIR60294 on UCSC Golden Path with GeneCards custom track

PIR60294 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for PIR60294 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for Cytogenetic band and RefSeq DNA sequence for PIR60294 Gene

Function for PIR60294 Gene

Phenotypes From GWAS Catalog for PIR60294 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for PIR60294 Gene

Localization for PIR60294 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for PIR60294 Gene

Pathways & Interactions for PIR60294 Gene

SuperPathways for PIR60294 Gene

No Data Available

Interacting Proteins for PIR60294 Gene

Gene Ontology (GO) - Biological Process for PIR60294 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for PIR60294 Gene

Drugs & Compounds for PIR60294 Gene

No Compound Related Data Available

Transcripts for PIR60294 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for PIR60294 Gene

No ASD Table

Relevant External Links for PIR60294 Gene

GeneLoc Exon Structure for
PIR60294

No data available for mRNA/cDNA for PIR60294 Gene

Expression for PIR60294 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for PIR60294 Gene

Orthologs for PIR60294 Gene

No data available for Orthologs and Evolution for PIR60294 Gene

Paralogs for PIR60294 Gene

No data available for Paralogs for PIR60294 Gene

Variants for PIR60294 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for PIR60294 Gene

Disorders for PIR60294 Gene

No disorders were found for PIR60294 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for PIR60294 Gene

Publications for PIR60294 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A … Carmell MA (Nature 2006) 1
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1

Products for PIR60294 Gene

Sources for PIR60294 Gene

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